[Jsbml-svn] SF.net SVN: jsbml:[2254] trunk/extensions/spatial/src/org/sbml/jsbml/ext/ spatial/CoordinateReference.java

[<pd...@us...>]

Revision: 2254
          http://sourceforge.net/p/jsbml/code/2254
Author:   pdp10
Date:     2015-04-23 22:15:38 +0000 (Thu, 23 Apr 2015)
Log Message:
-----------
update spatial package v0.90

Modified Paths:
--------------
    trunk/extensions/spatial/src/org/sbml/jsbml/ext/spatial/CoordinateReference.java

Modified: trunk/extensions/spatial/src/org/sbml/jsbml/ext/spatial/CoordinateReference.java
===================================================================
--- trunk/extensions/spatial/src/org/sbml/jsbml/ext/spatial/CoordinateReference.java	2015-04-23 20:57:03 UTC (rev 2253)
+++ trunk/extensions/spatial/src/org/sbml/jsbml/ext/spatial/CoordinateReference.java	2015-04-23 22:15:38 UTC (rev 2254)
@@ -23,8 +23,10 @@
 
 import java.text.MessageFormat;
 import java.util.Map;
+import java.util.regex.Pattern;
 
 import org.sbml.jsbml.AbstractSBase;
+import org.sbml.jsbml.SBMLException;
 
 
 
@@ -111,6 +113,15 @@
     return coordinate != null;
   }
 
+  /**
+   * @param coordinate
+   */
+  public void setCoordinate(String coordinate) {
+    if (!Pattern.matches("[a-z]*", coordinate)) {
+      throw new SBMLException("The value is not all lower-case.");
+    }
+    setCoordinate(CoordinateKind.valueOf(coordinate.toUpperCase()));
+  }
 
   /**
    * @param coordinate the coordinate to set
@@ -151,7 +162,7 @@
       isAttributeRead = true;
       if (attributeName.equals(SpatialConstants.coordinate)) {
         try {
-          setCoordinate(CoordinateKind.valueOf(value));
+          setCoordinate(value);          
         } catch (Exception e) {
           MessageFormat.format(
             SpatialConstants.bundle.getString("COULD_NOT_READ"), value,

This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site.