I have launched a new project on sourceforge to extend Mondrian for use with large biology data sets.
What may be of general interest is that we are using Mondrian to aggregate non-traditional data
types such as strings, graphs, images & c. which are very common in biology data. Also, JPivot works nicely to report non-numeric data in the cells, such as strings or images. I can imagine other applications that might want to have graphs or other kinds of non-numeric data in their measure cells so some of the modifications we are doing here may be of interest.
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