[Joelib-devel] Re: [Joelib-help] Joelib and Matlab

[Joerg K. W. <we...@in...>]

Hi Ersin,

1. Have you checked the classpath
2. Have you tried a simpler .jar file and did you manage the simpler case?
3. Instead of using JOELib from Matlab you can also use Matlab from 
JOELib with the JMatLink-JNI-Wrapper.
4. Which system, which Matlab version, please ensure that you managed to 
run a smaller Java-Matlab example.

For what do you need this connection? Maybe I can offer some 
Java-Matlab-JNI examples.

Kind regards, Joerg

> Hi,
> 
>  
> 
> I am trying to run Joelib under Matlab, but failed to run the example
> m-files in Joelib matlab toolbox. 
> 
> I added joelib2.jar and log4j.jar to the Matlab's jarext directory and
> added these to the classpath.txt file.  I verified that the JVM I am
> running for Matlab is Java 1.4.2_04. 
> 
> I am receiving the following error message when I try to run
> showmolecules m-file
> 
>  
> 
> showmolecules('multiple.mol', 'SDF');
> 
> ??? Undefined variable "joelib" or class
> "joelib.io.IOTypeHolder.instance".
> 
>  
> 
> Error in ==> showmolecules at 36
> 
> ioHolder=joelib.io.IOTypeHolder.instance;
> 
>  
> 
> Any help will be appreciated
> 
>  
> 
> Thanks,
> 
>  
> 
> Ersin Bayram, Ph.D.
> 
> Wake Forest University School of Medicine
> 
>  
> 
>  
> 
>  
> 
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> 
> 


-- 
Dipl. Chem. Joerg K. Wegner
Center of Bioinformatics Tuebingen (ZBIT)
Department of Computer Architecture
Univ. Tuebingen, Sand 1, D-72076 Tuebingen, Germany
Phone: (+49/0) 7071 29 78970
Fax: (+49/0) 7071 29 5091
E-Mail: mailto:we...@in...
WWW:    http://www-ra.informatik.uni-tuebingen.de
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