[Joelib-help] JOESmilesParser

[deepu m. <mar...@ya...>]

Hi

Im using JOESmilesParser.smiToMol to convert read
smile into mol.but if i have dummy atom represented by
a [*] in the smile, JOESmilesParser gives this error

10:04:43 [INFO ] wsi.ra.PropertyHolder                
   - Loading joelib.prope
rties from classpath and/or jar-file.
10:04:43 [INFO ] joelib.data.JOEElementTable          
   - Using element table:
 joelib/data/plain/element.txt
10:04:43 [INFO ] joelib.io.IOTypeHolder               
   - 22 input/output type
s loaded.
xxxxxxxxx before
10:04:43 [ERROR] joelib.molecule.JOEMol               
   - _mod is negative - E
ndModify() called too many times
inside
SMILES entry "[*]c1cccc2c3CCOC([*])([*])c3(nc12)"
could not be loaded.

why is this So.Any suggestion 

Regards

deepak


	

	
		
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