[Joelib-help] Kekule mode in JOEMol

[Joerg W. <we...@in...>]

Hi all,

there is still a kekulizing-method in JOEMol available, which is now used
for:
- visualize structures without aromatic rings in kekule mode
- image export and PDF export
- MDL SDF export without aromatic bond flag

The changes are added to CVS and the tutorial was updated.
The flags in the properties file work now correctly:
1. joelib.gui.render.Renderer2DModel.useKekuleStructure=true

2. #SD Files
   joelib.io.types.MDLSD.writeAromaticityAsConjugatedSystem=false

Kind regards, Joerg


Dipl. Chem. Joerg K. Wegner
Center of Bioinformatics Tuebingen (ZBIT)
Department of Computer Architecture
Univ. Tuebingen, Sand 1, D-72076 Tuebingen, Germany
Phone: (+49/0) 7071 29 78970
Fax: (+49/0) 7071 29 5091
E-Mail: mailto:we...@in...
WWW:    http://www-ra.informatik.uni-tuebingen.de
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