Re: [Jmol-developers] The all new Jmol 11

[Einar C. <ein...@gm...>]

So you recommend using jvxl files. What other formats besides JVXL do you
recommend. Spartan perhaps? And more Important how can I translate .cube or
G98 files to JVXL?


Thx.

2007/8/5, Bob Hanson <ha...@st...>:
>
> Einar Coutin wrote:
>
> > Great it worked fine.
> >
> > I have a couple more questions:
> > 1.-now when you load a new model if you had set spin on; it will
> > switch back to off.
>
> correct. This is an intentional change.
>
> > 2.-MOs now appear by default in orange, why not leave em red and blue?
>
> MOs appear in red/blue when loaded directly from the file using the MO
> command. Are you using isosurface and CUBE files, perhaps? I do not
> recommend this, as it requires massive downloads. But if you are doing
> that, use the phase and color options to isosurface:
>
>   isosurface phase color red blue "data/benzene-homo.cub"
>
> >
> > This are not a big deal I know just minor details.
> >
> > 2007/7/29, Bob Hanson <ha...@st... <mailto:ha...@st...>>:
> >
> >     Einar Coutin wrote:
> >
> >     >
> >     > 1.-You changed again the aspect ratio system of the Jmol Applet,
> >
> >
> >     I do not believe this is the case. We did, however, change the
> >     perspective model slightly. Try "set perspectiveModel 10" to use
> >     the old
> >     model. In certain cases you may see significant differences,
> >     particularly with zoom settings.
> >
> >
> >     But that's not the problem with your applet on the page below,
> anway.
> >     There you are setting applet height/width to 700x700 in a frame
> >     that has
> >     smaller size and no option to overflow gracefully.
> >
> >     > now my moleculas are loaded on my application out of center, check
> >     > fenix.cecalc.ula.ve/moleculas
> >     <http://fenix.cecalc.ula.ve/moleculas>
> >     <http://fenix.cecalc.ula.ve/moleculas>
> >     > and hit on the Visualizador Image that appears on the site header.
> >     > What can I do to instruct the jmolApplet() function to fill the
> >     entire
> >     > web frame with percentages instead of using pixels? For example:
> >     > jmolApplet(100%,100%)
> >
> >
> >     jmolApplet(["100%","100%"],)
> >
> >
> >
> >     --
> >     Robert M. Hanson
> >     Professor of Chemistry
> >     St. Olaf College
> >     Northfield, MN
> >     http://www.stolaf.edu/people/hansonr
> >
> >
> >     If nature does not answer first what we want,
> >     it is better to take what answer we get.
> >
> >     -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
> >
> >
> >
> >
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>
> --
> Robert M. Hanson
> Professor of Chemistry
> St. Olaf College
> Northfield, MN
> http://www.stolaf.edu/people/hansonr
>
>
> If nature does not answer first what we want,
> it is better to take what answer we get.
>
> -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
>
>
>
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