I'm sending the SMILES string to NCI; the return from NCI is then sent to
ChemDoodle. I don't think NCI will return a file without the hydrogen atoms,
so... oh, wait, I know how to do it! Silly me!...
On Tue, Jul 26, 2011 at 10:19 AM, Paul Pillot <
> Hi Bob,
> To have a nice drawing in chemdoodle you need to remove the H from Jmol. To
> do that I use the subset script command.
> subset not hydrogen; print write(\"mol\"); subset
Robert M. Hanson
Professor of Chemistry
St. Olaf College
1520 St. Olaf Ave.
Northfield, MN 55057
If nature does not answer first what we want,
it is better to take what answer we get.
-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
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