Hi i am trying to implement the jmol in my application but when i try to
upload the molecule it show's
FileManager opening /media/66881A6A881A394F/1.mol
openFile(/media/66881A6A881A394F/1.mol): 78 ms
i am unable to visualize my molecule only a blank applets comes kindly
suggest a suitable solution for this problem . And i also want's to know
that can i write the mol2 file using jmol or is there any way to write the
mol2 file using jmol.
Thanks & Regards
I have no experience in embedding Jmol within another applet or app,
but I ahev experience using the Jmol applet.
Are you aware of the Java security limitations when using the
unsigned applet? It cannot access any folder for reading files. That
might be your problem.
Have you checked the Java Console for errors? Those may describe the
I don't think that Jmol can output MOL2 files, only MOL, PDB and XYZ.
May I ask why do you need mol2?
You could use a converter like OpenBabel.