From: Philip B. <pb...@sa...> - 2004-01-28 18:05:23
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<HTML> <HEAD> <TITLE>Structure 457</TITLE> </HEAD> <BODY bgcolor="#FFF6C4" text="#0000FF"> <center><H3><FONT FACE="Times New Roman">Structure 457 </FONT></H3></center> <applet codebase ="../jmol" code ="JmolApplet" archive="JmolApplet.jar" width = "400" height = "400"> <param name ="bgcolor" value ="#CCFFFF"> <param name ="load" value = "cell457b.pdb"> <param name="script" value="select all;cpk on;cpk 0.40;wireframe on;wireframe 0.15;select oxygen; cpk 0.1;wireframe 0.1"> </applet> </BODY> </HTML> |
From: Miguel H. <mi...@ho...> - 2004-01-28 21:35:26
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Philip, There seems to be a little confusion over the 'codebase' attribute of the= 'applet' tag. Other than that ... it works just fine for me ... on a Linux box. Can't try it on Win32/Mac OS 9/Mac OS X I'm going to send another message about this ... Miguel > I think our virus protection blocked this the first time because it was= > blocking everything. I am trying again. > > Begin forwarded message: > >> From: Philip Bays <pbays=40saintmarys.edu> >> Date: January 28, 2004 10:06:34 AM EST >> To: jmol-users-request=40lists.sourceforge.net >> Subject: HTML coding >> >> Miguel and all: >> >> I am working on OSX - latest Panther. I was having mixed success with= >> Pat's web page yesterday and asked to have a copy of the file and the= >> source. I played with them and am having even more mixed success. I= >> am attaching three files to this note. One is the necessary pdb >> file. >> The cell 457b.html file is Pat's original, modified only to get the >> path correct for the pdb file. The other (c) file is my modification.= >> >> Note that all I have done is changed the applet code line. >> >> I am not an HTML programmer, so I may have done something fatal. >> However, here are the results on OSX. >> >> In Safari b fails because =22applet is no inited; c works fine. >> In both Mozilla and Camino I get the error message >> java.lang.classNotFoundExceptioon: JmolApplet. >> >> The interesting thing is that b worked from Pat's web page as >> originally written with both Camino and Mozilla; Safari did not. >> >> Can any experts give me some guidance as to what is going on? Is that= >> first line in Pat's applet code directing to the location of the >> applet in his file system? -------------------------------------------------- Miguel Howard miguel=40howards.org c/Pe=F1a Primera 11-13 esc dcha 6B 37002 Salamanca Espa=F1a Spain -------------------------------------------------- telefono casa 923 27 10 82 movil 650 52 54 58 -------------------------------------------------- To call from the US dial 9:00 am Pacific US =3D home 011 34 923 27 10 82 12:00 noon Eastern US =3D cell 011 34 650 52 54 58 6:00 pm Spain -------------------------------------------------- |
From: Miguel H. <mt...@mt...> - 2004-01-29 00:28:18
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>> The cell 457b.html file is Pat's original, modified only to get the >> path correct for the pdb file. The other (c) file is my modification. >> >> Note that all I have done is changed the applet code line. >> >> I am not an HTML programmer, so I may have done something fatal. The codebase parameter was incorrectly specified in the original 457b.html ... it should *not* have worked on any browser. >> However, here are the results on OSX. >> >> In Safari b fails because "applet is no inited; Safari's behavior is correct. >> c works fine. For this to work you must have put the JmolApplet.jar file in the same directory as 457c.html >> In both Mozilla and Camino I get the error message >> java.lang.classNotFoundExceptioon: JmolApplet. for 457b.html this is the correct behavior >> The interesting thing is that b worked from Pat's web page as >> originally written with both Camino and Mozilla; Safari did not. Camino and Mozilla should *not* have worked. It a bug in Camino & Mozilla. Safari's behavior is correct. >> Can any experts give me some guidance as to what is going on? Is that >> first line in Pat's applet code directing to the location of the >> applet in his file system? See my other posting ... look closely at 'codebase' ... let me know if something isn't clear. Miguel |
From: Jan R. <jr...@im...> - 2004-01-31 05:24:36
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Hi Philip, in RasMol2.7.2.1 there is a set unitcell on command, which I missed in Jmol, although the set axis command is implemented in Jmol (RasWin = only Windows version - had wrong Y axis labeling - Jmol is correct, I presume) so if the set unitcell command would be implemented in Jmol, no fake atoms will be needed to show the unit cell. Regards, Jan |