From: <ha...@us...> - 2009-09-20 02:56:20
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Revision: 11539 http://jmol.svn.sourceforge.net/jmol/?rev=11539&view=rev Author: hansonr Date: 2009-09-20 02:56:03 +0000 (Sun, 20 Sep 2009) Log Message: ----------- JmolPopup.htm upgrade Modified Paths: -------------- trunk/Jmol/src/org/jmol/_documents/jmolpopup.htm Removed Paths: ------------- trunk/Jmol/src/org/jmol/_documents/jmolpopupmenu.js Modified: trunk/Jmol/src/org/jmol/_documents/jmolpopup.htm =================================================================== --- trunk/Jmol/src/org/jmol/_documents/jmolpopup.htm 2009-09-20 02:37:51 UTC (rev 11538) +++ trunk/Jmol/src/org/jmol/_documents/jmolpopup.htm 2009-09-20 02:56:03 UTC (rev 11539) @@ -1,34 +1,5 @@ <html> -<head> -<script language="javascript"> -Menu = new Array(); -function addMenuItem(info) { - var S = info.split("\t"); - var id = S[1]; - var label = S[2]; - var script = S[3]; - var i = Menu.length; - Menu[i] = new Array(); - Menu[i].id = id.substring(11); - Menu[i].label = label; - Menu[i].script = script; -} - -function showMenu(){ - var s = "<table border=1 cellspacing=3 cellpadding=3>"; - for (var i = 0; i < Menu.length; i++) if(Menu[i].label){ - var m = Menu[i]; - var S = m.id.split("."); - s+="<tr><td valign=top>"+m.id+"</td><td valign=top>"+m.label+"</td><td valign=top>"+m.script+"</td></tr>" - - } - s+="</table>" - document.write(s); -} -</script> -<script language="javascript" src="jmolpopupmenu.js"></script> -</head> <body> -<script language="javascript">showMenu()</script> +see <a href=http://chemapps.stolaf.edu/jmol/docs/examples-11/JmolPopup.htm>http://chemapps.stolaf.edu/jmol/docs/examples-11/JmolPopup.htm</a> </body> </html> \ No newline at end of file Deleted: trunk/Jmol/src/org/jmol/_documents/jmolpopupmenu.js =================================================================== --- trunk/Jmol/src/org/jmol/_documents/jmolpopupmenu.js 2009-09-20 02:37:51 UTC (rev 11538) +++ trunk/Jmol/src/org/jmol/_documents/jmolpopupmenu.js 2009-09-20 02:56:03 UTC (rev 11539) @@ -1,632 +0,0 @@ -//Jmol Version 10.9.74 2006-10-09 21:20 -addMenuItem(' .popupMenu.- - ') -addMenuItem(' .popupMenu.selectMenu.showSelectionsCheckbox Selection Halos set showSelections [true|false] ') -addMenuItem(' .popupMenu.selectMenu.- - ') -addMenuItem(' .popupMenu.selectMenu.selectAll All select all ') -addMenuItem(' .popupMenu.selectMenu.selectNone None select none ') -addMenuItem(' ---- ') -addMenuItem(' .popupMenu.selectMenu.- - ') -addMenuItem(' .popupMenu.selectMenu.PDBproteinMenu.allProtein All select protein ') -addMenuItem(' .popupMenu.selectMenu.PDBproteinMenu.proteinBackbone Backbone select protein and backbone ') -addMenuItem(' .popupMenu.selectMenu.PDBproteinMenu.proteinSideChains Side Chains select protein and not backbone ') -addMenuItem(' .popupMenu.selectMenu.PDBproteinMenu.- - ') -addMenuItem(' .popupMenu.selectMenu.PDBproteinMenu.polar Polar Residues select protein and polar ') -addMenuItem(' .popupMenu.selectMenu.PDBproteinMenu.nonpolar Nonpolar Residues select protein and not polar ') -addMenuItem(' .popupMenu.selectMenu.PDBproteinMenu.- - ') -addMenuItem(' .popupMenu.selectMenu.PDBproteinMenu.positiveCharge Basic Residues (+) select protein and basic ') -addMenuItem(' .popupMenu.selectMenu.PDBproteinMenu.negativeCharge Acidic Residues (-) select protein and acidic ') -addMenuItem(' .popupMenu.selectMenu.PDBproteinMenu.noCharge Uncharged Residues select protein and not (acidic,basic) ') -addMenuItem(' .popupMenu.selectMenu.PDBproteinMenu.- - ') -addMenuItem(' ---- ') -addMenuItem(' ---- ') -addMenuItem(' .popupMenu.selectMenu.PDBnucleicMenu.allNucleic All select nucleic ') -addMenuItem(' .popupMenu.selectMenu.PDBnucleicMenu.nucleicBackbone Backbone select nucleic and backbone ') -addMenuItem(' .popupMenu.selectMenu.PDBnucleicMenu.nucleicBases Bases select nucleic and not backbone ') -addMenuItem(' .popupMenu.selectMenu.PDBnucleicMenu.- - ') -addMenuItem(' .popupMenu.selectMenu.PDBnucleicMenu.DNA DNA select dna ') -addMenuItem(' .popupMenu.selectMenu.PDBnucleicMenu.RNA RNA select rna ') -addMenuItem(' .popupMenu.selectMenu.PDBnucleicMenu.- - ') -addMenuItem(' .popupMenu.selectMenu.PDBnucleicMenu.A A select a ') -addMenuItem(' .popupMenu.selectMenu.PDBnucleicMenu.C C select c ') -addMenuItem(' .popupMenu.selectMenu.PDBnucleicMenu.G G select g ') -addMenuItem(' .popupMenu.selectMenu.PDBnucleicMenu.T T select t ') -addMenuItem(' .popupMenu.selectMenu.PDBnucleicMenu.U U select u ') -addMenuItem(' .popupMenu.selectMenu.PDBnucleicMenu.- - ') -addMenuItem(' .popupMenu.selectMenu.PDBnucleicMenu.atPairs AT pairs select a,t ') -addMenuItem(' .popupMenu.selectMenu.PDBnucleicMenu.auPairs AU pairs select a,u ') -addMenuItem(' .popupMenu.selectMenu.PDBnucleicMenu.gcPairs GC pairs select g,c ') -addMenuItem(' ---- ') -addMenuItem(' ---- ') -addMenuItem(' .popupMenu.selectMenu.PDBheteroMenu.- - ') -addMenuItem(' .popupMenu.selectMenu.PDBheteroMenu.allHetero All PDB "HETATM" select hetero ') -addMenuItem(' .popupMenu.selectMenu.PDBheteroMenu.Solvent All Solvent select solvent ') -addMenuItem(' .popupMenu.selectMenu.PDBheteroMenu.Water All Water select water ') -addMenuItem(' .popupMenu.selectMenu.PDBheteroMenu.- - ') -addMenuItem(' .popupMenu.selectMenu.PDBheteroMenu.Ligand Ligand (hetero and not solvent) select ligand ') -addMenuItem(' .popupMenu.selectMenu.PDBheteroMenu.exceptWater Nonaqueous HETATM (hetero and not water) select hetero and not water ') -addMenuItem(' .popupMenu.selectMenu.PDBheteroMenu.nonWaterSolvent Nonaqueous Solvent (solvent and not water) select solvent and not water ') -addMenuItem(' ---- ') -addMenuItem(' .popupMenu.selectMenu.PDBcarbohydrate Carbohydrate select carbohydrate ') -addMenuItem(' .popupMenu.selectMenu.PDBnoneOfTheAbove None of the above select not(hetero,protein,nucleic,carbohydrate) ') -addMenuItem(' .popupMenu.selectMenu.- - ') -addMenuItem(' .popupMenu.selectMenu.invertSelection Invert Selection select not selected ') -addMenuItem(' .popupMenu.selectMenu.restrictToSelection Display Selected Only select selected; restrict selected ') -addMenuItem(' ---- ') -addMenuItem(' .popupMenu.colorMenu.colorrasmolCheckbox RasMol Colors set colorrasmol [true|false] ') -addMenuItem(' .popupMenu.colorMenu.- - ') -addMenuItem(' .popupMenu.colorMenu.colorAtomsMenu.SchemeMenu.cpk Element (CPK) color Atoms cpk ') -addMenuItem(' .popupMenu.colorMenu.colorAtomsMenu.SchemeMenu.amino Amino color Atoms amino ') -addMenuItem(' .popupMenu.colorMenu.colorAtomsMenu.SchemeMenu.structure Secondary Structure color Atoms structure ') -addMenuItem(' .popupMenu.colorMenu.colorAtomsMenu.SchemeMenu.chain Chain color Atoms chain ') -addMenuItem(' .popupMenu.colorMenu.colorAtomsMenu.SchemeMenu.formalcharge Formal Charge color Atoms formalcharge ') -addMenuItem(' .popupMenu.colorMenu.colorAtomsMenu.SchemeMenu.partialcharge Partial Charge color Atoms partialcharge ') -addMenuItem(' ---- ') -addMenuItem(' .popupMenu.colorMenu.colorAtomsMenu.- - ') -addMenuItem(' .popupMenu.colorMenu.colorAtomsMenu.black Black color Atoms black ') -addMenuItem(' .popupMenu.colorMenu.colorAtomsMenu.white White color Atoms white ') -addMenuItem(' .popupMenu.colorMenu.colorAtomsMenu.red Red color Atoms red ') -addMenuItem(' .popupMenu.colorMenu.colorAtomsMenu.orange Orange color Atoms orange ') -addMenuItem(' .popupMenu.colorMenu.colorAtomsMenu.yellow Yellow color Atoms yellow ') -addMenuItem(' .popupMenu.colorMenu.colorAtomsMenu.green Green color Atoms green ') -addMenuItem(' .popupMenu.colorMenu.colorAtomsMenu.cyan Cyan color Atoms cyan ') -addMenuItem(' .popupMenu.colorMenu.colorAtomsMenu.blue Blue color Atoms blue ') -addMenuItem(' .popupMenu.colorMenu.colorAtomsMenu.indigo Indigo color Atoms indigo ') -addMenuItem(' .popupMenu.colorMenu.colorAtomsMenu.violet Violet color Atoms violet ') -addMenuItem(' .popupMenu.colorMenu.colorAtomsMenu.- - ') -addMenuItem(' .popupMenu.colorMenu.colorAtomsMenu.opaque Make Opaque color Atoms opaque ') -addMenuItem(' .popupMenu.colorMenu.colorAtomsMenu.translucent Make Translucent color Atoms translucent ') -addMenuItem(' ---- ') -addMenuItem(' .popupMenu.colorMenu.colorBondsMenu.none Inherit color Bonds none ') -addMenuItem(' .popupMenu.colorMenu.colorBondsMenu.- - ') -addMenuItem(' .popupMenu.colorMenu.colorBondsMenu.black Black color Bonds black ') -addMenuItem(' .popupMenu.colorMenu.colorBondsMenu.white White color Bonds white ') -addMenuItem(' .popupMenu.colorMenu.colorBondsMenu.red Red color Bonds red ') -addMenuItem(' .popupMenu.colorMenu.colorBondsMenu.orange Orange color Bonds orange ') -addMenuItem(' .popupMenu.colorMenu.colorBondsMenu.yellow Yellow color Bonds yellow ') -addMenuItem(' .popupMenu.colorMenu.colorBondsMenu.green Green color Bonds green ') -addMenuItem(' .popupMenu.colorMenu.colorBondsMenu.cyan Cyan color Bonds cyan ') -addMenuItem(' .popupMenu.colorMenu.colorBondsMenu.blue Blue color Bonds blue ') -addMenuItem(' .popupMenu.colorMenu.colorBondsMenu.indigo Indigo color Bonds indigo ') -addMenuItem(' .popupMenu.colorMenu.colorBondsMenu.violet Violet color Bonds violet ') -addMenuItem(' .popupMenu.colorMenu.colorBondsMenu.- - ') -addMenuItem(' .popupMenu.colorMenu.colorBondsMenu.opaque Make Opaque color Bonds opaque ') -addMenuItem(' .popupMenu.colorMenu.colorBondsMenu.translucent Make Translucent color Bonds translucent ') -addMenuItem(' ---- ') -addMenuItem(' .popupMenu.colorMenu.colorHbondsMenu.none Inherit color Hbonds none ') -addMenuItem(' .popupMenu.colorMenu.colorHbondsMenu.- - ') -addMenuItem(' .popupMenu.colorMenu.colorHbondsMenu.black Black color Hbonds black ') -addMenuItem(' .popupMenu.colorMenu.colorHbondsMenu.white White color Hbonds white ') -addMenuItem(' .popupMenu.colorMenu.colorHbondsMenu.red Red color Hbonds red ') -addMenuItem(' .popupMenu.colorMenu.colorHbondsMenu.orange Orange color Hbonds orange ') -addMenuItem(' .popupMenu.colorMenu.colorHbondsMenu.yellow Yellow color Hbonds yellow ') -addMenuItem(' .popupMenu.colorMenu.colorHbondsMenu.green Green color Hbonds green ') -addMenuItem(' .popupMenu.colorMenu.colorHbondsMenu.cyan Cyan color Hbonds cyan ') -addMenuItem(' .popupMenu.colorMenu.colorHbondsMenu.blue Blue color Hbonds blue ') -addMenuItem(' .popupMenu.colorMenu.colorHbondsMenu.indigo Indigo color Hbonds indigo ') -addMenuItem(' .popupMenu.colorMenu.colorHbondsMenu.violet Violet color Hbonds violet ') -addMenuItem(' .popupMenu.colorMenu.colorHbondsMenu.- - ') -addMenuItem(' .popupMenu.colorMenu.colorHbondsMenu.opaque Make Opaque color Hbonds opaque ') -addMenuItem(' .popupMenu.colorMenu.colorHbondsMenu.translucent Make Translucent color Hbonds translucent ') -addMenuItem(' ---- ') -addMenuItem(' .popupMenu.colorMenu.colorSSbondsMenu.none Inherit color SSbonds none ') -addMenuItem(' .popupMenu.colorMenu.colorSSbondsMenu.- - ') -addMenuItem(' .popupMenu.colorMenu.colorSSbondsMenu.black Black color SSbonds black ') -addMenuItem(' .popupMenu.colorMenu.colorSSbondsMenu.white White color SSbonds white ') -addMenuItem(' .popupMenu.colorMenu.colorSSbondsMenu.red Red color SSbonds red ') -addMenuItem(' .popupMenu.colorMenu.colorSSbondsMenu.orange Orange color SSbonds orange ') -addMenuItem(' .popupMenu.colorMenu.colorSSbondsMenu.yellow Yellow color SSbonds yellow ') -addMenuItem(' .popupMenu.colorMenu.colorSSbondsMenu.green Green color SSbonds green ') -addMenuItem(' .popupMenu.colorMenu.colorSSbondsMenu.cyan Cyan color SSbonds cyan ') -addMenuItem(' .popupMenu.colorMenu.colorSSbondsMenu.blue Blue color SSbonds blue ') -addMenuItem(' .popupMenu.colorMenu.colorSSbondsMenu.indigo Indigo color SSbonds indigo ') -addMenuItem(' .popupMenu.colorMenu.colorSSbondsMenu.violet Violet color SSbonds violet ') -addMenuItem(' .popupMenu.colorMenu.colorSSbondsMenu.- - ') -addMenuItem(' .popupMenu.colorMenu.colorSSbondsMenu.opaque Make Opaque color SSbonds opaque ') -addMenuItem(' .popupMenu.colorMenu.colorSSbondsMenu.translucent Make Translucent color SSbonds translucent ') -addMenuItem(' ---- ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorBackboneMenu.none Inherit color Backbone none ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorBackboneMenu.- - ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorBackboneMenu.SchemeMenu.cpk Element (CPK) color Backbone cpk ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorBackboneMenu.SchemeMenu.amino Amino color Backbone amino ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorBackboneMenu.SchemeMenu.structure Secondary Structure color Backbone structure ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorBackboneMenu.SchemeMenu.chain Chain color Backbone chain ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorBackboneMenu.SchemeMenu.formalcharge Formal Charge color Backbone formalcharge ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorBackboneMenu.SchemeMenu.partialcharge Partial Charge color Backbone partialcharge ') -addMenuItem(' ---- ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorBackboneMenu.- - ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorBackboneMenu.black Black color Backbone black ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorBackboneMenu.white White color Backbone white ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorBackboneMenu.red Red color Backbone red ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorBackboneMenu.orange Orange color Backbone orange ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorBackboneMenu.yellow Yellow color Backbone yellow ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorBackboneMenu.green Green color Backbone green ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorBackboneMenu.cyan Cyan color Backbone cyan ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorBackboneMenu.blue Blue color Backbone blue ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorBackboneMenu.indigo Indigo color Backbone indigo ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorBackboneMenu.violet Violet color Backbone violet ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorBackboneMenu.- - ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorBackboneMenu.opaque Make Opaque color Backbone opaque ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorBackboneMenu.translucent Make Translucent color Backbone translucent ') -addMenuItem(' ---- ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorCartoonsMenu.none Inherit color Cartoons none ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorCartoonsMenu.- - ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorCartoonsMenu.SchemeMenu.cpk Element (CPK) color Cartoons cpk ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorCartoonsMenu.SchemeMenu.amino Amino color Cartoons amino ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorCartoonsMenu.SchemeMenu.structure Secondary Structure color Cartoons structure ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorCartoonsMenu.SchemeMenu.chain Chain color Cartoons chain ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorCartoonsMenu.SchemeMenu.formalcharge Formal Charge color Cartoons formalcharge ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorCartoonsMenu.SchemeMenu.partialcharge Partial Charge color Cartoons partialcharge ') -addMenuItem(' ---- ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorCartoonsMenu.- - ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorCartoonsMenu.black Black color Cartoons black ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorCartoonsMenu.white White color Cartoons white ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorCartoonsMenu.red Red color Cartoons red ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorCartoonsMenu.orange Orange color Cartoons orange ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorCartoonsMenu.yellow Yellow color Cartoons yellow ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorCartoonsMenu.green Green color Cartoons green ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorCartoonsMenu.cyan Cyan color Cartoons cyan ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorCartoonsMenu.blue Blue color Cartoons blue ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorCartoonsMenu.indigo Indigo color Cartoons indigo ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorCartoonsMenu.violet Violet color Cartoons violet ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorCartoonsMenu.- - ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorCartoonsMenu.opaque Make Opaque color Cartoons opaque ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorCartoonsMenu.translucent Make Translucent color Cartoons translucent ') -addMenuItem(' ---- ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorRibbonsMenu.none Inherit color Ribbons none ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorRibbonsMenu.- - ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorRibbonsMenu.SchemeMenu.cpk Element (CPK) color Ribbons cpk ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorRibbonsMenu.SchemeMenu.amino Amino color Ribbons amino ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorRibbonsMenu.SchemeMenu.structure Secondary Structure color Ribbons structure ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorRibbonsMenu.SchemeMenu.chain Chain color Ribbons chain ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorRibbonsMenu.SchemeMenu.formalcharge Formal Charge color Ribbons formalcharge ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorRibbonsMenu.SchemeMenu.partialcharge Partial Charge color Ribbons partialcharge ') -addMenuItem(' ---- ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorRibbonsMenu.- - ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorRibbonsMenu.black Black color Ribbons black ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorRibbonsMenu.white White color Ribbons white ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorRibbonsMenu.red Red color Ribbons red ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorRibbonsMenu.orange Orange color Ribbons orange ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorRibbonsMenu.yellow Yellow color Ribbons yellow ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorRibbonsMenu.green Green color Ribbons green ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorRibbonsMenu.cyan Cyan color Ribbons cyan ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorRibbonsMenu.blue Blue color Ribbons blue ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorRibbonsMenu.indigo Indigo color Ribbons indigo ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorRibbonsMenu.violet Violet color Ribbons violet ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorRibbonsMenu.- - ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorRibbonsMenu.opaque Make Opaque color Ribbons opaque ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorRibbonsMenu.translucent Make Translucent color Ribbons translucent ') -addMenuItem(' ---- ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorRocketsMenu.none Inherit color Rockets none ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorRocketsMenu.- - ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorRocketsMenu.SchemeMenu.cpk Element (CPK) color Rockets cpk ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorRocketsMenu.SchemeMenu.amino Amino color Rockets amino ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorRocketsMenu.SchemeMenu.structure Secondary Structure color Rockets structure ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorRocketsMenu.SchemeMenu.chain Chain color Rockets chain ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorRocketsMenu.SchemeMenu.formalcharge Formal Charge color Rockets formalcharge ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorRocketsMenu.SchemeMenu.partialcharge Partial Charge color Rockets partialcharge ') -addMenuItem(' ---- ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorRocketsMenu.- - ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorRocketsMenu.black Black color Rockets black ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorRocketsMenu.white White color Rockets white ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorRocketsMenu.red Red color Rockets red ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorRocketsMenu.orange Orange color Rockets orange ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorRocketsMenu.yellow Yellow color Rockets yellow ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorRocketsMenu.green Green color Rockets green ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorRocketsMenu.cyan Cyan color Rockets cyan ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorRocketsMenu.blue Blue color Rockets blue ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorRocketsMenu.indigo Indigo color Rockets indigo ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorRocketsMenu.violet Violet color Rockets violet ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorRocketsMenu.- - ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorRocketsMenu.opaque Make Opaque color Rockets opaque ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorRocketsMenu.translucent Make Translucent color Rockets translucent ') -addMenuItem(' ---- ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorStrandsMenu.none Inherit color Strands none ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorStrandsMenu.- - ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorStrandsMenu.SchemeMenu.cpk Element (CPK) color Strands cpk ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorStrandsMenu.SchemeMenu.amino Amino color Strands amino ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorStrandsMenu.SchemeMenu.structure Secondary Structure color Strands structure ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorStrandsMenu.SchemeMenu.chain Chain color Strands chain ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorStrandsMenu.SchemeMenu.formalcharge Formal Charge color Strands formalcharge ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorStrandsMenu.SchemeMenu.partialcharge Partial Charge color Strands partialcharge ') -addMenuItem(' ---- ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorStrandsMenu.- - ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorStrandsMenu.black Black color Strands black ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorStrandsMenu.white White color Strands white ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorStrandsMenu.red Red color Strands red ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorStrandsMenu.orange Orange color Strands orange ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorStrandsMenu.yellow Yellow color Strands yellow ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorStrandsMenu.green Green color Strands green ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorStrandsMenu.cyan Cyan color Strands cyan ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorStrandsMenu.blue Blue color Strands blue ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorStrandsMenu.indigo Indigo color Strands indigo ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorStrandsMenu.violet Violet color Strands violet ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorStrandsMenu.- - ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorStrandsMenu.opaque Make Opaque color Strands opaque ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorStrandsMenu.translucent Make Translucent color Strands translucent ') -addMenuItem(' ---- ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorTraceMenu.none Inherit color Trace none ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorTraceMenu.- - ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorTraceMenu.SchemeMenu.cpk Element (CPK) color Trace cpk ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorTraceMenu.SchemeMenu.amino Amino color Trace amino ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorTraceMenu.SchemeMenu.structure Secondary Structure color Trace structure ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorTraceMenu.SchemeMenu.chain Chain color Trace chain ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorTraceMenu.SchemeMenu.formalcharge Formal Charge color Trace formalcharge ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorTraceMenu.SchemeMenu.partialcharge Partial Charge color Trace partialcharge ') -addMenuItem(' ---- ') -addMenuItem(' .popupMenu.colorMenu.colorPDBstructuresMenu.colorTraceMenu.- - 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') -addMenuItem(' .popupMenu.FRAMESanimateMenu.animFpsMenu.animfps5 5 set anim fps 5 ') -addMenuItem(' .popupMenu.FRAMESanimateMenu.animFpsMenu.animfps10 10 set anim fps 10 ') -addMenuItem(' .popupMenu.FRAMESanimateMenu.animFpsMenu.animfps20 20 set anim fps 20 ') -addMenuItem(' .popupMenu.FRAMESanimateMenu.animFpsMenu.animfps30 30 set anim fps 30 ') -addMenuItem(' .popupMenu.FRAMESanimateMenu.animFpsMenu.animfps50 50 set anim fps 50 ') -addMenuItem(' ---- ') -addMenuItem(' ---- ') -addMenuItem(' .popupMenu.- - ') -addMenuItem(' .popupMenu.measureMenu.showMeasurementsCheckbox Show Measurements set showMeasurements [true|false] ') -addMenuItem(' .popupMenu.measureMenu.- - ') -addMenuItem(' .popupMenu.measureMenu.measureOff Double-Click begins and ends all measurements set pickingstyle MEASURE OFF; set picking OFF ') -addMenuItem(' .popupMenu.measureMenu.measureDistance Click for distance measurement set pickingstyle MEASURE; set picking MEASURE DISTANCE ') -addMenuItem(' .popupMenu.measureMenu.measureAngle Click for angle measurement set pickingstyle MEASURE; set picking MEASURE ANGLE ') -addMenuItem(' .popupMenu.measureMenu.measureTorsion Click for torsion (dihedral) measurement set pickingstyle MEASURE; set picking MEASURE TORSION ') -addMenuItem(' .popupMenu.measureMenu.- - ') -addMenuItem(' .popupMenu.measureMenu.measureDelete Delete measurements measure delete ') -addMenuItem(' .popupMenu.measureMenu.measureList List measurements console on;show measurements ') -addMenuItem(' .popupMenu.measureMenu.- - ') -addMenuItem(' .popupMenu.measureMenu.distanceNanometers Distance units nanometers select *; set measure nanometers ') -addMenuItem(' .popupMenu.measureMenu.distanceAngstroms Distance units Angstroms select *; set measure angstroms ') -addMenuItem(' .popupMenu.measureMenu.distancePicometers Distance units picometers select *; set measure picometers ') -addMenuItem(' ---- ') -addMenuItem(' .popupMenu.pickingMenu.pickOff Off set picking off ') -addMenuItem(' .popupMenu.pickingMenu.pickCenter Center set picking center ') -addMenuItem(' .popupMenu.pickingMenu.pickLabel Label set picking label ') -addMenuItem(' .popupMenu.pickingMenu.pickAtom Select atom set picking atom ') -addMenuItem(' .popupMenu.pickingMenu.pickChain Select chain set picking chain ') -addMenuItem(' .popupMenu.pickingMenu.pickElement Select element set picking element ') -addMenuItem(' .popupMenu.pickingMenu.pickGroup Select group set picking group ') -addMenuItem(' .popupMenu.pickingMenu.pickMolecule Select molecule set picking molecule ') -addMenuItem(' .popupMenu.pickingMenu.pickSite Select site set picking site ') -addMenuItem(' .popupMenu.pickingMenu.pickSpin Spin set picking spin ') -addMenuItem(' ---- ') -addMenuItem(' .popupMenu.- - ') -addMenuItem(' .popupMenu.showConsole Console console ') -addMenuItem(' .popupMenu.showMenu.showHistory History console on;show history ') -addMenuItem(' .popupMenu.showMenu.showFile File Contents console on;show file ') -addMenuItem(' .popupMenu.showMenu.showFileHeader File Header console on;getProperty FileHeader ') -addMenuItem(' .popupMenu.showMenu.- - ') -addMenuItem(' .popupMenu.showMenu.showOrient Orientation console on;show orientation ') -addMenuItem(' .popupMenu.showMenu.showMeasure Measure console on;show measure ') -addMenuItem(' .popupMenu.showMenu.- - ') -addMenuItem(' .popupMenu.showMenu.showSpacegroup Space group console on;show spacegroup ') -addMenuItem(' .popupMenu.showMenu.SYMMETRYshowSymmetry Symmetry console on;show symmetry ') -addMenuItem(' .popupMenu.showMenu.showUnitCell Unit cell console on;show unitcell ') -addMenuItem(' .popupMenu.showMenu.- - ') -addMenuItem(' .popupMenu.showMenu.showIsosurface Isosurface JVXL data console on;show isosurface ') -addMenuItem(' .popupMenu.showMenu.showMo Molecular orbital JVXL data console on;show mo ') -addMenuItem(' .popupMenu.showMenu.- - ') -addMenuItem(' .popupMenu.showMenu.extractMOL Extract MOL data console on;getproperty extractModel "visible" ') -addMenuItem(' ---- ') -addMenuItem(' .popupMenu.- - ') -addMenuItem(' .popupMenu.aboutMenu.jmolUrl www.jmol.org show url "http://www.jmol.org" ') -addMenuItem(' .popupMenu.aboutMenu.mouseManualUrl Mouse Manual show url "http://wiki.jmol.org/index.php/Mouse_Manual" ') -addMenuItem(' .popupMenu.aboutMenu.translatingUrl Translations show url "http://wiki.jmol.org/index.php/Internationalisation" ') -addMenuItem(' ---- ') This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site. |