Please send the offending file to

On Tue, Jan 19, 2010 at 10:25 PM, Mhairi Marshall <> wrote:



I am using Jmol 11.8.17 and having problems with jmolAppletInline trying to get it to read the script.


What I want it to do is switch off the wire and just display the protein cartoon group colours and the molecule to spin around.


First of all I can’t get any changes in the molecule without putting in the delay & spin.

Second, the delay only works with ‘delay 2’, if I change it to ‘delay  1’ then it just freezes.


This command works but it has the wireframe for 2 seconds and then displays the cartoons and spins. I want it to display the cartoon from the start and then spin.


jmolAppletInline(650, initPDB, "delay 2;spin on;select all;cpk off;ribbons off;wireframe off;cartoons;select protein;color cartoon group;");




Mhairi Marshall

Throughout its 18-year history, RSA Conference consistently attracts the
world's best and brightest in the field, creating opportunities for Conference
attendees to learn about information security's most important issues through
interactions with peers, luminaries and emerging and established companies.
Jmol-developers mailing list

Robert M. Hanson
Professor of Chemistry
St. Olaf College
1520 St. Olaf Ave.
Northfield, MN 55057
phone: 507-786-3107

If nature does not answer first what we want,
it is better to take what answer we get.

-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900