That's done for Jmol 12.3.10. See http://chemapps.stolaf.edu/jmol/docs/examples-12/Jmol-12.zip

version=12.3.10_dev

# new feature: write PDB adds CONECT records
#  -- for all multiple bonding and all HETATM bonds
#  -- uses CONECT i j j  to indicate multiple bonding


On Fri, Dec 16, 2011 at 7:00 AM, Robert Hanson <hansonr@stolaf.edu> wrote:
Sure

load xxxx.sdf
write xxxx.pdb

Right now it loses all the multiple bonding, but I'm going to fix that right now. You won't be able to store generic aromatic bonding.

Bob


On Thu, Dec 15, 2011 at 11:55 PM, rohit mehrotra <mehrotrarohit87@gmail.com> wrote:
Hi all i have one basic query can we convert .sdf file into .PDB using Jmol. 

--
Thanks & Regards
Rohit Mehrotra


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--
Robert M. Hanson
Professor of Chemistry
St. Olaf College
1520 St. Olaf Ave.
Northfield, MN 55057
http://www.stolaf.edu/people/hansonr
phone: 507-786-3107


If nature does not answer first what we want,
it is better to take what answer we get.

-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900



--
Robert M. Hanson
Professor of Chemistry
St. Olaf College
1520 St. Olaf Ave.
Northfield, MN 55057
http://www.stolaf.edu/people/hansonr
phone: 507-786-3107


If nature does not answer first what we want,
it is better to take what answer we get.

-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900