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#575 "Unrecognized file format" for Molcas-generated molden files (case sensitive Jmol)

v12
open
nobody
None
5
2017-02-01
2016-03-21
Nikolay
No

An error message appears when I try to open Molcas-generated moden file:

script ERROR: unrecognized file format for file
./trip.rasscf.molden
 [MOLDEN FORMAT]
 [N_ATOMS]               
27

It works fine if I change in the first line [MOLDEN FORMAT] to [Molden FORMAT].
Case-sensitive input parser?

Related

Bugs: #575

Discussion

  • Bob Hanson

    Bob Hanson - 2016-03-21

    http://www.cmbi.ru.nl/molden/molden_format.html does indicate that the
    specific format should be "[Molden Format]" not some capitalization of
    that. If you can find where the specification allows for [MOLDEN FORMAT] I
    will change Jmol to suit.

    On Mon, Mar 21, 2016 at 1:40 PM, Nikolay anisoham@users.sf.net wrote:


    Status: open
    Group: v12
    Created: Mon Mar 21, 2016 06:40 PM UTC by Nikolay
    Last Updated: Mon Mar 21, 2016 06:40 PM UTC
    Owner: nobody

    An error message appears when I try to open Molcas-generated moden file:

    script ERROR: unrecognized file format for file./trip.rasscf.molden
    [MOLDEN FORMAT]
    [N_ATOMS] 27

    It works fine if I change in the first line [MOLDEN FORMAT] to [Molden
    FORMAT]
    .
    Case-sensitive input parser?


    Sent from sourceforge.net because you indicated interest in
    https://sourceforge.net/p/jmol/bugs/575/

    To unsubscribe from further messages, please visit
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    --
    Robert M. Hanson
    Larson-Anderson Professor of Chemistry
    Chair, Department of Chemistry
    St. Olaf College
    Northfield, MN
    http://www.stolaf.edu/people/hansonr

    If nature does not answer first what we want,
    it is better to take what answer we get.

    -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900

     

    Related

    Bugs: #575

    • Nikolay

      Nikolay - 2016-03-29

      I agree with that, it should be changed on the molcas side (or every time by user).

      Nevertheless most of the other visualising software do not check for the case of that line, including Molden itself.

      http://www.cmbi.ru.nl/molden/molden_format.html does indicate that the
      specific format should be "[Molden Format]" not some capitalization of
      that. If you can find where the specification allows for [MOLDEN FORMAT] I
      will change Jmol to suit.

       
    • Jellby

      Jellby - 2017-09-10

      The molden "specification" doesn't say anything about case sensitivity, but it mentions "[ATOMS]" while the example shows "[Atoms]" and, more significantly, molden itself opens files with uppercase "[MOLDEN FORMAT]" without complaint.

      I don't say Molcas should not or will not be changed, but I believe Jmol should be changed too.

       
      • Bob Hanson

        Bob Hanson - 2017-09-11

        OK

        On Sun, Sep 10, 2017 at 1:47 AM, Jellby jellby@users.sf.net wrote:

        The molden "specification" doesn't say anything about case sensitivity,
        but it mentions "[ATOMS]" while the example shows "[Atoms]" and, more
        significantly, molden itself opens files with uppercase "[MOLDEN FORMAT]"
        without complaint.

        I don't say Molcas should not or will not be changed, but I believe Jmol
        should be changed too.


        Status: open
        Group: v12
        Created: Mon Mar 21, 2016 06:40 PM UTC by Nikolay
        Last Updated: Wed Feb 01, 2017 12:58 PM UTC
        Owner: nobody

        An error message appears when I try to open Molcas-generated moden file:

        script ERROR: unrecognized file format for file./trip.rasscf.molden
        [MOLDEN FORMAT]
        [N_ATOMS] 27

        It works fine if I change in the first line [MOLDEN FORMAT] to [Molden
        FORMAT]
        .
        Case-sensitive input parser?


        Sent from sourceforge.net because you indicated interest in
        https://sourceforge.net/p/jmol/bugs/575/

        To unsubscribe from further messages, please visit
        https://sourceforge.net/auth/subscriptions/

        --
        Robert M. Hanson
        Professor of Chemistry
        St. Olaf College
        Northfield, MN
        http://www.stolaf.edu/people/hansonr

        If nature does not answer first what we want,
        it is better to take what answer we get.

        -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900

         
        • Bob Hanson

          Bob Hanson - 2017-09-11

          This was corrected for Jmol 14.7.4 on Oct. 4, 2016 by René Kanters. Please
          let me know if it is still a problem.

          Bob Hanson

           
  • Alex Zech

    Alex Zech - 2017-02-01

    Hello there,
    I just committed the necessary changes to the Molcas repository so that the first line of a Molcas-generated Molden file now reads "[Molden Format]". If the changes are accepted (which I'm sure will be the case) the next release of Molcas will generate Molden files compatible with Jmol.

     

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