this is a difficult bug to file because I can't pin down exactly when it happens (it seems random at the moment). I am loading an external file with values, and coloring atoms according to those values. a demo can be seen here:
or, since my server is wicked slow, downloaded from here:
basically, I load the external file and then use blocks of select statements to color atoms; for example:
select backbone1 and (property_potc1 > 1 and property_potc1 < 3)
color atoms yellow
color atoms translucent 0.9
clicking a radio button in the above demo should apply a single coloring script of this form. but, even though the script and data for each button are exactly the same, often the resulting color scheme is very different. for example, sometimes I see a nice, and extremely wrong, rainbow gradient in the right-hand structure. but not always.
I hope that description made sense. can anyone see a reason why this might be happening?
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