[Jboost-cvs] jboost/src/jboost/examples AttributeDescription.java, 1.3, 1.3.4.1 Example.java, 1.2,

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Update of /cvsroot/jboost/jboost/src/jboost/examples
In directory fdv4jf1.ch3.sourceforge.com:/tmp/cvs-serv11232/src/jboost/examples

Modified Files:
      Tag: jboost-2_0
	AttributeDescription.java Example.java ExampleDescription.java 
	ExampleSet.java LabelDescription.java TextDescription.java 
	WeightDescription.java 
Log Message:
jboost 2.0

Index: LabelDescription.java
===================================================================
RCS file: /cvsroot/jboost/jboost/src/jboost/examples/LabelDescription.java,v
retrieving revision 1.1.1.1
retrieving revision 1.1.1.1.4.1
diff -C2 -d -r1.1.1.1 -r1.1.1.1.4.1
*** LabelDescription.java	16 May 2007 04:06:02 -0000	1.1.1.1
--- LabelDescription.java	8 Jun 2009 23:40:49 -0000	1.1.1.1.4.1
***************
*** 12,32 ****
   */
  public class LabelDescription extends FiniteDescription {
!     LabelDescription(String name, Configuration c, List okValues)
  	throws ClassNotFoundException {
! 	super(name,c,okValues);
! 	attributeClass = Class.forName("jboost.examples.LabelDescription");
! 	multiLabel = c.getBool("multiLabel", false);
!     }

!     private boolean multiLabel;
!     public boolean isMultiLabel() {
! 	return multiLabel;
!     }

!     public String toString() {
! 	return super.toString() + " multiLabel: " + multiLabel;
!     }

! /*
      public String toString(Attribute attr) throws Exception {
  	String retval=new String();
--- 12,32 ----
   */
  public class LabelDescription extends FiniteDescription {
! 	LabelDescription(String name, Configuration c, List okValues)
  	throws ClassNotFoundException {
! 		super(name,c,okValues);
! 		attributeClass = Class.forName("jboost.examples.LabelDescription");
! 		multiLabel = c.getBool("multiLabel", false);
! 	}

! 	private boolean multiLabel;
! 	public boolean isMultiLabel() {
! 		return multiLabel;
! 	}

! 	public String toString() {
! 		return super.toString() + " multiLabel: " + multiLabel;
! 	}

! 	/*
      public String toString(Attribute attr) throws Exception {
  	String retval=new String();
***************
*** 46,81 ****
  	return(retval);
      }
! */

!     /** Reads a MultiFinite attribute 
!      *  Note that it is currently based on String but should use StringBuffer 
!      *  Also note that right now it can only deal with one value.
!      */
!     public Attribute str2Att(String string) throws BadAttException {
! 	if(string == null) return new Label(null);

! 	StringTokenizer st = new StringTokenizer(string);
! 	if (!multiLabel && (st.countTokens() != 1))
! 	    throw new BadAttException((st.countTokens() == 0
! 				       ? "Zero"
! 				       : "Multiple")
! 				      + " labels found when expecting single label: "+string);
! 	String s;
! 	boolean v[] = new boolean[getNoOfValues()];
! 	while(st.hasMoreElements()) {
! 	    s = st.nextToken();
! 	    if(!caseSignificant)
! 		s = s.toLowerCase();
! 	    if(!punctuationSignificant)
! 		s = StringOp.removePunctuation(s);
! 	    if(map.containsKey(s)) 
! 		v[((Integer) map.get(s)).intValue()] = true;
! 	    else if(map.containsKey("*"))
! 		v[((Integer) map.get("*")).intValue()] = true;
! 	    else
! 		throw(new BadAttException("Unknown label: "+s
! 					  +" when not allowed."));
  	}
- 	return new Label(v);
-     }
  }
--- 46,81 ----
  	return(retval);
      }
! 	 */

! 	/** Reads a MultiFinite attribute 
! 	 *  Note that it is currently based on String but should use StringBuffer 
! 	 *  Also note that right now it can only deal with one value.
! 	 */
! 	public Attribute str2Att(String string) throws BadAttException {
! 		if(string == null) return new Label(null);

! 		StringTokenizer st = new StringTokenizer(string);
! 		if (!multiLabel && (st.countTokens() != 1))
! 			throw new BadAttException((st.countTokens() == 0
! 					? "Zero"
! 					  : "Multiple")
! 					  + " labels found when expecting single label: "+string);
! 		String s;
! 		boolean v[] = new boolean[getNoOfValues()];
! 		while(st.hasMoreElements()) {
! 			s = st.nextToken();
! 			if(!caseSignificant)
! 				s = s.toLowerCase();
! 			if(!punctuationSignificant)
! 				s = StringOp.removePunctuation(s);
! 			if(map.containsKey(s)) 
! 				v[((Integer) map.get(s)).intValue()] = true;
! 			else if(map.containsKey("*"))
! 				v[((Integer) map.get("*")).intValue()] = true;
! 			else
! 				throw(new BadAttException("Unknown label: "+s
! 				                          +" when not allowed."));
! 		}
! 		return new Label(v);
  	}
  }

Index: Example.java
===================================================================
RCS file: /cvsroot/jboost/jboost/src/jboost/examples/Example.java,v
retrieving revision 1.2
retrieving revision 1.2.2.1
diff -C2 -d -r1.2 -r1.2.2.1
*** Example.java	11 Sep 2008 21:25:45 -0000	1.2
--- Example.java	8 Jun 2009 23:40:49 -0000	1.2.2.1
***************
*** 13,20 ****
    /** a textual comment */
    protected String m_comment;
    /** a pointer to the exampleDescription */
    protected ExampleDescription m_exampleDescription;

-   
    /**
     * Default ctor
--- 13,21 ----
    /** a textual comment */
    protected String m_comment;
+   /** INDEX */
+   protected int m_index;
    /** a pointer to the exampleDescription */
    protected ExampleDescription m_exampleDescription;

    /**
     * Default ctor
***************
*** 23,30 ****
     * @param ed
     */
!   public Example(Attribute[] attArray, Label label, double weight, ExampleDescription ed) {
      m_instance = new Instance(attArray);
      m_label=label;
      m_weight= weight;
      m_exampleDescription = ed;
    }
--- 24,32 ----
     * @param ed
     */
!   public Example(Attribute[] attArray, int index, Label label, double weight, ExampleDescription ed) {
      m_instance = new Instance(attArray);
      m_label=label;
      m_weight= weight;
+     m_index = index;
      m_exampleDescription = ed;
    }
***************
*** 36,40 ****
     */
    public Example(Attribute[] attArray, Label label) {
!     this(attArray,label, 1.0, null);
    }

--- 38,42 ----
     */
    public Example(Attribute[] attArray, Label label) {
!     this(attArray,- 1, label, 1.0, null);
    }

***************
*** 62,66 ****
    }

! 
    /**
     * Get the weight of this example
--- 64,83 ----
    }

!   /**
!    * Get the INDEX of this example
!    * @return INDEX
!    */
!   public int getIndex() {
!     return m_index;
!   }
!   
!   /**
!    * Set the INDEX of this example
!    * @param INDEX
!    */
!   public void setIndex(int index) {
!     m_index= index;
!   } 
!   
    /**
     * Get the weight of this example

Index: TextDescription.java
===================================================================
RCS file: /cvsroot/jboost/jboost/src/jboost/examples/TextDescription.java,v
retrieving revision 1.2
retrieving revision 1.2.4.1
diff -C2 -d -r1.2 -r1.2.4.1
*** TextDescription.java	16 Feb 2008 00:02:19 -0000	1.2
--- TextDescription.java	8 Jun 2009 23:40:49 -0000	1.2.4.1
***************
*** 19,44 ****
   */
  public class TextDescription extends AttributeDescription {
!     TextDescription(String name, Configuration c) throws ClassNotFoundException {
! 	attributeName = name;
! 	attributeClass = Class.forName("jboost.examples.SetAttribute");

! 	// get configuration parameters
! 	crucial=c.getBool("crucial",false);
! 	ignoreAttribute=c.getBool("ignoreAttribute",false);
! 	caseSignificant=c.getBool("caseSignificant",false);
! 	existence=c.getBool("existence",false);
! 	ngramsize=c.getInt("ngramsize",1);
! 	ngramtype = c.getString("ngramtype", "full").toLowerCase();	
! 	if (ngramsize < 1) // these should probably be SpecFileExceptions
! 	    throw new RuntimeException("Illegal ngramsize received for attribute "
! 				       + name);
! 	if (!(ngramtype.equals("fixed") ||
! 	      ngramtype.equals("full") ||
! 	      ngramtype.equals("sparse")))
! 	    throw new RuntimeException("Illegal ngram type for attribute "
! 				       + name);
!     }

!     /** Reads a text attribute.
      Main method, str2Att, converts text to an arrya of integers. 
      The integers reflect the order in which the word appeared in
--- 19,44 ----
   */
  public class TextDescription extends AttributeDescription {
! 	TextDescription(String name, Configuration c) throws ClassNotFoundException {
! 		attributeName = name;
! 		attributeClass = Class.forName("jboost.examples.SetAttribute");

! 		// get configuration parameters
! 		crucial=c.getBool("crucial",false);
! 		ignoreAttribute=c.getBool("ignoreAttribute",false);
! 		caseSignificant=c.getBool("caseSignificant",false);
! 		existence=c.getBool("existence",false);
! 		ngramsize=c.getInt("ngramsize",1);
! 		ngramtype = c.getString("ngramtype", "full").toLowerCase();	
! 		if (ngramsize < 1) // these should probably be SpecFileExceptions
! 			throw new RuntimeException("Illegal ngramsize received for attribute "
! 			                           + name);
! 		if (!(ngramtype.equals("fixed") ||
! 				ngramtype.equals("full") ||
! 				ngramtype.equals("sparse")))
! 			throw new RuntimeException("Illegal ngram type for attribute "
! 			                           + name);
! 	}

! 	/** Reads a text attribute.
      Main method, str2Att, converts text to an arrya of integers. 
      The integers reflect the order in which the word appeared in
***************
*** 67,234 ****

      wordList - the unique least that appeared int this document, int order.
! */
!     public Attribute str2Att(String string) throws BadAttException {
! 	try{if(string == null) return new SetAttribute(null,this);}
! 	catch(RepeatedElementException e){ 
! 	    throw new RuntimeException
! 		("TextDescription.str2Att: got a RepeatedElementException "
! 		 +"on a null set !!");
! 	}
! 	string=string.trim();
! 	if(string.length()==0) {
! 	    try { return(new SetAttribute(new int[0])); }
! 	    catch(RepeatedElementException e) {
! 		throw new RuntimeException
! 		    ("RepeatedElementException in TextDescription.str2Att");
! 	    }
! 	}
! 	WordTable wt = WordTable.globalTable;
! 	// going over words int string and mapping each to an int 
! 	HashMap locMap = new HashMap(); 
! 	// locMap - maps every word that appeared in local document to an
! 	// object cotaining the number of times the word appeared int 
! 	// current document.
! 	int numLocWords = 0; // Number of words seen so far int text
! 	String word; // word to process next
! 	ArrayList wordList = new ArrayList();
! 	// the unique "words" that appeared in this document, where a
! 	// word may actually be an ngram
! 	Enumeration st;
! 	if (ngramtype.equals("sparse"))
! 	    st = new SparseNgram(string, ngramsize);
! 	else if (ngramtype.equals("full"))
! 	    st = new FullNgram(string, ngramsize);
! 	else // fixed ngram
! 	    st = new FixedNgram(string, ngramsize);
! 	try {
! 	    String[] wordArr = string.split(" ");
! 	    //while ( st.hasMoreElements()) {
! 	    for (int i=0; i<wordArr.length; i++) {
! 	   	//word = (String) st.nextElement();
! 		word = wordArr[i];
! 		// if(Monitor.logLevel>3) Monitor.log("DIAG TextAttReader.str2Att: word=" +word); 
! 		if (wt.frozen && !wt.map.containsKey(word))
! 		    continue;

! 		if (locMap.containsKey(word)) { // word appeared in curr text
! 		    ((LocWord)locMap.get(word)).inc();
  		}
! 		else { // word not in curr text
! 		    locMap.put(word, new LocWord()); 
! 		    if (!wt.frozen && !wt.map.containsKey(word)) { // string is nowhere
! 			if(Monitor.logLevel>30)
! 			    Monitor.log("adding to wordTable word:"+word
! 					+", token="+wt.size);
! 			wt.map.put(word, new GloWord(wt.size)); //put new key 
! 			wt.words.add(word);
! 		        wt.size++;
! 		    }
! 		    wordList.add(word); 
! 		    numLocWords++;
  		}
! 		((GloWord)wt.map.get(word)).inc();
! 	    }
  	}
! 	catch (Exception e) { 
! 		if(Monitor.logLevel>3) Monitor.log(e.getMessage()+e);
! 		throw new BadAttException("Error reading: "+string,0,0);
  	}
- 	int[] wordTokenArr = new int[numLocWords];
- 	for (int i=0; i<numLocWords; i++)
- 	    wordTokenArr[i] =((GloWord)wt.map.get(wordList.get(i))).getToken();

! 	Attribute setAttribute = null;
! 	try{setAttribute = new SetAttribute(wordTokenArr,this);}
! 	catch(Exception e) { 
! 	    e.printStackTrace();
! 	    if(Monitor.logLevel>3) 
! 		Monitor.log(e.getMessage()+e);
! 	    throw new BadAttException("Error reading: "+string+"\n"+e,0,0);
  	}
- 	return setAttribute; 
-     }

!     private int ngramsize;
!     private String ngramtype;

!     public String getAttributeValue(int i) {
! 	return (String)WordTable.globalTable.words.get(i);
!     }

!     public String toString() {
! 	String retval=new String(attributeName);
! 	retval+=" "+attributeClass.getName();
! 	retval+=" crucial: "+crucial;
! 	retval+=" ignoreAttribute: "+ignoreAttribute;
! 	retval+=" caseSignificant: "+caseSignificant;
! 	retval+=" existence: "+existence;
! 	retval+=" ngramsize: "+ngramsize;
! 	retval+=" ngramtype: "+ngramtype;
! 	return(retval);
!     }
!     
!     public String toString(Attribute attr) {
! 	if(attr.isDefined()==false) return("UNDEFINED");
! 	String retval=new String();
! 	int[] tok=((SetAttribute)attr).getList();
! 	// This should be improved when the reader is integrated.
! 	if(tok==null) return(null);
! 	
! 	int lineLength=0;
! 	for(int i=0; i<tok.length; i++) {
! 	    String s=(String) getAttributeValue(tok[i]);
! 	    if(s.startsWith("1 ")) // if this is a simple one word token
! 		// then remove the prefix
! 		s=s.substring(2);
! 	    retval += s;
! 	    if(i<tok.length-1) retval+=",";
! 	    lineLength += s.length()+1;
! 	    if(lineLength > 80) {
! 		lineLength=0;
! 		retval+="\n";
! 	    }
  	}
- 	
- 	return(retval);
-     }

!     static public void setTokenSet(String[] t) {
! 	if (WordTable.globalTable.size > 0)
! 	    throw new RuntimeException("attempted to call TextDescription."
! 				       +"setTokenSet with a nonempty hash "
! 				       +"table");
! 	for (int i = 0; i < t.length; i++) {
! 	    if (WordTable.globalTable.map.containsKey(t[i]))
! 		throw new IllegalArgumentException("tokens passed to "
! 						   +"TextDescription.setTokenSet must all be unique");
! 	    WordTable.globalTable.map.put(t[i], new GloWord(i));
! 	    WordTable.globalTable.words.add(t[i]);
  	}
! 	WordTable.globalTable.size = t.length;
! 	WordTable.globalTable.frozen = true;
!     }
!     
  }

  /** contains the global token of a word and number of times it appeared
      in all documents
! */
  class GloWord extends LocWord{
!     private int token;
!     public GloWord() {this.token=0;}
!     public GloWord(int token) {this.token = token;}
!     public int getToken() {return token;}
  }

  /** contains the number of times a word appeared in current document*/
  class LocWord implements Serializable{
!     int numApp; // number of times word appeared
!     public LocWord() {this.numApp = 1;}
!     public void inc() {numApp++;}	    
!     public int getNumApp() {return numApp;}	    
  }

!     
!     

--- 67,234 ----

      wordList - the unique least that appeared int this document, int order.
! 	 */
! 	public Attribute str2Att(String string) throws BadAttException {
! 		try{if(string == null) return new SetAttribute(null,this);}
! 		catch(RepeatedElementException e){ 
! 			throw new RuntimeException
! 			("TextDescription.str2Att: got a RepeatedElementException "
! 			 +"on a null set !!");
! 		}
! 		string=string.trim();
! 		if(string.length()==0) {
! 			try { return(new SetAttribute(new int[0])); }
! 			catch(RepeatedElementException e) {
! 				throw new RuntimeException
! 				("RepeatedElementException in TextDescription.str2Att");
! 			}
! 		}
! 		WordTable wt = WordTable.globalTable;
! 		// going over words int string and mapping each to an int 
! 		HashMap locMap = new HashMap(); 
! 		// locMap - maps every word that appeared in local document to an
! 		// object cotaining the number of times the word appeared int 
! 		// current document.
! 		int numLocWords = 0; // Number of words seen so far int text
! 		String word; // word to process next
! 		ArrayList wordList = new ArrayList();
! 		// the unique "words" that appeared in this document, where a
! 		// word may actually be an ngram
! 		Enumeration st;
! 		if (ngramtype.equals("sparse"))
! 			st = new SparseNgram(string, ngramsize);
! 		else if (ngramtype.equals("full"))
! 			st = new FullNgram(string, ngramsize);
! 		else // fixed ngram
! 			st = new FixedNgram(string, ngramsize);
! 		try {
! 			String[] wordArr = string.split(" ");
! 			//while ( st.hasMoreElements()) {
! 			for (int i=0; i<wordArr.length; i++) {
! 				//word = (String) st.nextElement();
! 				word = wordArr[i];
! 				// if(Monitor.logLevel>3) Monitor.log("DIAG TextAttReader.str2Att: word=" +word); 
! 				if (wt.frozen && !wt.map.containsKey(word))
! 					continue;

! 				if (locMap.containsKey(word)) { // word appeared in curr text
! 					((LocWord)locMap.get(word)).inc();
! 				}
! 				else { // word not in curr text
! 					locMap.put(word, new LocWord()); 
! 					if (!wt.frozen && !wt.map.containsKey(word)) { // string is nowhere
! 						if(Monitor.logLevel>30)
! 							Monitor.log("adding to wordTable word:"+word
! 							            +", token="+wt.size);
! 						wt.map.put(word, new GloWord(wt.size)); //put new key 
! 						wt.words.add(word);
! 						wt.size++;
! 					}
! 					wordList.add(word); 
! 					numLocWords++;
! 				}
! 				((GloWord)wt.map.get(word)).inc();
! 			}
  		}
! 		catch (Exception e) { 
! 			if(Monitor.logLevel>3) Monitor.log(e.getMessage()+e);
! 			throw new BadAttException("Error reading: "+string,0,0);
  		}
! 		int[] wordTokenArr = new int[numLocWords];
! 		for (int i=0; i<numLocWords; i++)
! 			wordTokenArr[i] =((GloWord)wt.map.get(wordList.get(i))).getToken();
! 
! 		Attribute setAttribute = null;
! 		try{setAttribute = new SetAttribute(wordTokenArr,this);}
! 		catch(Exception e) { 
! 			e.printStackTrace();
! 			if(Monitor.logLevel>3) 
! 				Monitor.log(e.getMessage()+e);
! 			throw new BadAttException("Error reading: "+string+"\n"+e,0,0);
! 		}
! 		return setAttribute; 
  	}
! 
! 	private int ngramsize;
! 	private String ngramtype;
! 
! 	public String getAttributeValue(int i) {
! 		return (String)WordTable.globalTable.words.get(i);
  	}

! 	public String toString() {
! 		String retval=new String(attributeName);
! 		retval+=" "+attributeClass.getName();
! 		retval+=" crucial: "+crucial;
! 		retval+=" ignoreAttribute: "+ignoreAttribute;
! 		retval+=" caseSignificant: "+caseSignificant;
! 		retval+=" existence: "+existence;
! 		retval+=" ngramsize: "+ngramsize;
! 		retval+=" ngramtype: "+ngramtype;
! 		return(retval);
  	}

! 	public String toString(Attribute attr) {
! 		if(attr.isDefined()==false) return("UNDEFINED");
! 		String retval=new String();
! 		int[] tok=((SetAttribute)attr).getList();
! 		// This should be improved when the reader is integrated.
! 		if(tok==null) return(null);

! 		int lineLength=0;
! 		for(int i=0; i<tok.length; i++) {
! 			String s=(String) getAttributeValue(tok[i]);
! 			if(s.startsWith("1 ")) // if this is a simple one word token
! 				// then remove the prefix
! 				s=s.substring(2);
! 			retval += s;
! 			if(i<tok.length-1) retval+=",";
! 			lineLength += s.length()+1;
! 			if(lineLength > 80) {
! 				lineLength=0;
! 				retval+="\n";
! 			}
! 		}

! 		return(retval);
  	}

! 	static public void setTokenSet(String[] t) {
! 		if (WordTable.globalTable.size > 0)
! 			throw new RuntimeException("attempted to call TextDescription."
! 			                           +"setTokenSet with a nonempty hash "
! 			                           +"table");
! 		for (int i = 0; i < t.length; i++) {
! 			if (WordTable.globalTable.map.containsKey(t[i]))
! 				throw new IllegalArgumentException("tokens passed to "
! 				                                   +"TextDescription.setTokenSet must all be unique");
! 			WordTable.globalTable.map.put(t[i], new GloWord(i));
! 			WordTable.globalTable.words.add(t[i]);
! 		}
! 		WordTable.globalTable.size = t.length;
! 		WordTable.globalTable.frozen = true;
  	}
! 
  }

  /** contains the global token of a word and number of times it appeared
      in all documents
!  */
  class GloWord extends LocWord{
! 	private int token;
! 	public GloWord() {this.token=0;}
! 	public GloWord(int token) {this.token = token;}
! 	public int getToken() {return token;}
  }

  /** contains the number of times a word appeared in current document*/
  class LocWord implements Serializable{
! 	int numApp; // number of times word appeared
! 	public LocWord() {this.numApp = 1;}
! 	public void inc() {numApp++;}	    
! 	public int getNumApp() {return numApp;}	    
  }

! 
! 

Index: AttributeDescription.java
===================================================================
RCS file: /cvsroot/jboost/jboost/src/jboost/examples/AttributeDescription.java,v
retrieving revision 1.3
retrieving revision 1.3.4.1
diff -C2 -d -r1.3 -r1.3.4.1
*** AttributeDescription.java	23 Oct 2007 22:44:54 -0000	1.3
--- AttributeDescription.java	8 Jun 2009 23:40:49 -0000	1.3.4.1
***************
*** 33,37 ****
      if (name.equals(DataStream.LABELS_ATTR)) retval=new LabelDescription(name,options,okValues);
      else if (name.equals(DataStream.WEIGHT_ATTR)) retval= new WeightDescription(name, options);
!     //else if (name.equals(DataStream.ID_ATTR)) retval= new IdDescription(name, options);
      else if(type.equals("number")) retval=new NumberDescription(name,options);
      else if(type.equals("string")) retval=new StringDescription(name,options);
--- 33,37 ----
      if (name.equals(DataStream.LABELS_ATTR)) retval=new LabelDescription(name,options,okValues);
      else if (name.equals(DataStream.WEIGHT_ATTR)) retval= new WeightDescription(name, options);
!     else if (name.equals(DataStream.INDEX_ATTR)) retval= new IndexDescription(name, options);
      else if(type.equals("number")) retval=new NumberDescription(name,options);
      else if(type.equals("string")) retval=new StringDescription(name,options);

Index: ExampleSet.java
===================================================================
RCS file: /cvsroot/jboost/jboost/src/jboost/examples/ExampleSet.java,v
retrieving revision 1.4
retrieving revision 1.4.2.1
diff -C2 -d -r1.4 -r1.4.2.1
*** ExampleSet.java	3 Jan 2009 05:13:32 -0000	1.4
--- ExampleSet.java	8 Jun 2009 23:40:49 -0000	1.4.2.1
***************
*** 19,24 ****
     * The content of the ExampleSet */
    private Example[] exampleSet; 
-   public final String IndexName="INDEX"; // Indicates that a field is just an index, use to track individual examples in the log files.
-   private int indexLocation=-1; // The number of the attribute that stores the index.

    /** 
--- 19,22 ----
***************
*** 61,73 ****
      isBinary = (noOfLabels==2 && !multiLabel);

-     // Find out if there is an attribute whose name is IndexName. This attribute is used to relate examples in different datasets. 
-     for(int i=0; i<exampleDescription.getNoOfAttributes(); i++) {
-     	String name = exampleDescription.getAttributeDescription(i).getAttributeName();
-     	if(name.equals(IndexName)) {
-     		indexLocation=i;
-     		break;
-     	}
-         //System.out.printf("ExampleSet.indexLocation=%d%n", indexLocation);
-     }
    }

--- 59,62 ----
***************
*** 222,226 ****
        Predictor base) {

- 
      if (base != null) {
        if (curIter == lastIter)
--- 211,214 ----
***************
*** 235,242 ****
      }

- 
      for (int i = 0; i < exampleSet.length; i++)
        prediction[i] =
!         combined.predict(exampleSet[i].getInstance(),curIter);

      lastIter = curIter;
--- 223,230 ----
      }

      for (int i = 0; i < exampleSet.length; i++)
        prediction[i] =
!         //combined.predict(exampleSet[i].getInstance(),curIter);
!       	combined.predict(exampleSet[i].getInstance());

      lastIter = curIter;
***************
*** 291,295 ****
    /** check if there is an attribute whose name is "INDEX" **/
    public boolean hasIndex() {
! 	  return indexLocation>-1;
    }

--- 279,283 ----
    /** check if there is an attribute whose name is "INDEX" **/
    public boolean hasIndex() {
! 	  return exampleDescription.getIndexDescription() != null; 
    }

***************
*** 298,302 ****
  	  double[] indexes = new double[exampleSet.length];
  	  for(int i=0; i<indexes.length; i++) {
! 		  indexes[i]=((RealAttribute) exampleSet[i].getAttribute(indexLocation)).getValue();
  	  }
  	  return indexes;
--- 286,290 ----
  	  double[] indexes = new double[exampleSet.length];
  	  for(int i=0; i<indexes.length; i++) {
! 		  indexes[i]=(double) exampleSet[i].getIndex();
  	  }
  	  return indexes;

Index: ExampleDescription.java
===================================================================
RCS file: /cvsroot/jboost/jboost/src/jboost/examples/ExampleDescription.java,v
retrieving revision 1.2
retrieving revision 1.2.4.1
diff -C2 -d -r1.2 -r1.2.4.1
*** ExampleDescription.java	2 Oct 2007 20:34:56 -0000	1.2
--- ExampleDescription.java	8 Jun 2009 23:40:49 -0000	1.2.4.1
***************
*** 11,21 ****

    /** An AttributeDescription for the labels */
!   private LabelDescription label;

    /** An AttributeDescription for the example weights */
!   private WeightDescription weight;

    /** a description of each attribute */
!   private Vector attribute;

    /** the index of the example attribute that contains the label */
--- 11,24 ----

    /** An AttributeDescription for the labels */
!   private LabelDescription m_label;

    /** An AttributeDescription for the example weights */
!   private WeightDescription m_weight;
!   
!   /** An AttributeDescription for INDEX */
!   private IndexDescription m_index;

    /** a description of each attribute */
!   private Vector m_attribute;

    /** the index of the example attribute that contains the label */
***************
*** 25,44 ****
    private int m_weightIndex;

    /** Flag for using private sampling weights */
    private boolean m_useSamplingWeights;

-   
- 
- 
    /** 
     * Defaul constructor 								
     */
    public ExampleDescription() {
!     attribute=new Vector();
!     label= null;
!     weight= null;
      m_useSamplingWeights= false;
      m_labelIndex= -1;
      m_weightIndex= -1;
    }

--- 28,64 ----
    private int m_weightIndex;

+   /** the index of the example attribute that contains INDEX */
+   private int m_indexIndex;
+   
    /** Flag for using private sampling weights */
    private boolean m_useSamplingWeights;

    /** 
     * Defaul constructor 								
     */
    public ExampleDescription() {
!     m_attribute=new Vector();
!     m_label= null;
!     m_weight= null;
!     m_index= null;
      m_useSamplingWeights= false;
      m_labelIndex= -1;
      m_weightIndex= -1;
+     m_indexIndex= -1;
+   }
+ 
+   /**
+    *  Sets the index description.						
+    */
+   public void setIndex(AttributeDescription ad) {
+     m_index=(IndexDescription) ad;
+   }
+   
+   /**
+    *  Sets the index description.           
+    */
+   public void setIndex(AttributeDescription ad, int index) {
+     m_index=(IndexDescription) ad;
+     m_indexIndex= index;
    }

***************
*** 47,51 ****
     */
    public void setLabel(AttributeDescription ad) {
!     label=(LabelDescription) ad;
    }

--- 67,71 ----
     */
    public void setLabel(AttributeDescription ad) {
!     m_label=(LabelDescription) ad;
    }

***************
*** 54,58 ****
     */
    public void setLabel(AttributeDescription ad, int index) {
!     label=(LabelDescription) ad;
      m_labelIndex= index;
    }
--- 74,78 ----
     */
    public void setLabel(AttributeDescription ad, int index) {
!     m_label=(LabelDescription) ad;
      m_labelIndex= index;
    }
***************
*** 72,80 ****
    }

    /** 
     * Assign the weight description 
     */
    public void setWeight(AttributeDescription weightDescription) {
!     weight= (WeightDescription) weightDescription;
    }

--- 92,108 ----
    }

+   /**
+    * Return the index of the INDEX
+    */
+   public int getIndexIndex() {
+     return m_indexIndex;
+   }
+   
+   
    /** 
     * Assign the weight description 
     */
    public void setWeight(AttributeDescription weightDescription) {
!     m_weight= (WeightDescription) weightDescription;
    }

***************
*** 83,87 ****
     */
    public void setWeight(AttributeDescription weightDescription, int index) {
!     weight= (WeightDescription) weightDescription;
      m_weightIndex= index;
    }
--- 111,115 ----
     */
    public void setWeight(AttributeDescription weightDescription, int index) {
!     m_weight= (WeightDescription) weightDescription;
      m_weightIndex= index;
    }
***************
*** 91,97 ****
     */
    public WeightDescription getWeightDescription() {
!     return weight;
    }

    /**
     * If true, then the examples with this description will contain
--- 119,134 ----
     */
    public WeightDescription getWeightDescription() {
!     return m_weight;
    }

+   
+   /** 
+    * Return the Index Description
+    */
+   public IndexDescription getIndexDescription() {
+     return m_index;
+   }
+   
+   
    /**
     * If true, then the examples with this description will contain
***************
*** 113,117 ****
    /** Add an attribute description.						*/
    public void addAttribute(AttributeDescription ad) {
!     attribute.add(ad);
    }

--- 150,154 ----
    /** Add an attribute description.						*/
    public void addAttribute(AttributeDescription ad) {
!     m_attribute.add(ad);
    }

***************
*** 124,132 ****
      Label l= e.getLabel();
      Instance ins= e.getInstance();
!     retval += label.toString(l);
      int i=0;
      int s=ins.getSize();
      for(i=0; i < s; i++) {
!       retval += ((AttributeDescription) attribute.get(i)).toString(e.getAttribute(i));
      }
      return(retval);
--- 161,169 ----
      Label l= e.getLabel();
      Instance ins= e.getInstance();
!     retval += m_label.toString(l);
      int i=0;
      int s=ins.getSize();
      for(i=0; i < s; i++) {
!       retval += ((AttributeDescription) m_attribute.get(i)).toString(e.getAttribute(i));
      }
      return(retval);
***************
*** 137,154 ****
    public String toString() {
      String retval=new String();
!     for(int i=0; i<attribute.size(); i++) 
!       retval += (AttributeDescription) attribute.get(i) + "\n";
!     retval += label + "\n";
      return(retval);
    }

    public LabelDescription getLabelDescription() {
!     return(label);
    }

    public AttributeDescription[] getAttributes() {
!     AttributeDescription[] retval=new AttributeDescription[attribute.size()];
      for(int i=0;i<retval.length;i++) {
!       retval[i]=(AttributeDescription)attribute.get(i);
      }
      return(retval);
--- 174,191 ----
    public String toString() {
      String retval=new String();
!     for(int i=0; i<m_attribute.size(); i++) 
!       retval += (AttributeDescription) m_attribute.get(i) + "\n";
!     retval += m_label + "\n";
      return(retval);
    }

    public LabelDescription getLabelDescription() {
!     return(m_label);
    }

    public AttributeDescription[] getAttributes() {
!     AttributeDescription[] retval=new AttributeDescription[m_attribute.size()];
      for(int i=0;i<retval.length;i++) {
!       retval[i]=(AttributeDescription)m_attribute.get(i);
      }
      return(retval);
***************
*** 160,168 ****
     */
    public int getNoOfAttributes() {
!     return attribute.size();
    }

    public AttributeDescription getAttributeDescription(int i) {
!     return (AttributeDescription) attribute.get(i);
    }

--- 197,205 ----
     */
    public int getNoOfAttributes() {
!     return m_attribute.size();
    }

    public AttributeDescription getAttributeDescription(int i) {
!     return (AttributeDescription) m_attribute.get(i);
    }

Index: WeightDescription.java
===================================================================
RCS file: /cvsroot/jboost/jboost/src/jboost/examples/WeightDescription.java,v
retrieving revision 1.2
retrieving revision 1.2.4.1
diff -C2 -d -r1.2 -r1.2.4.1
*** WeightDescription.java	2 Oct 2007 20:34:56 -0000	1.2
--- WeightDescription.java	8 Jun 2009 23:40:49 -0000	1.2.4.1
***************
*** 9,13 ****
  public class WeightDescription extends NumberDescription {

!     public static final double MAX_WEIGHT = 1;

    WeightDescription(String name, Configuration config) 
--- 9,13 ----
  public class WeightDescription extends NumberDescription {

!   public static final double MAX_WEIGHT = 1;

    WeightDescription(String name, Configuration config) 
***************
*** 40,47 ****
--- 40,49 ----
  	    throw new BadAttException("The weight: " + weight + " is less than 0",0,0);          
          }
+         /*
          if (att > MAX_WEIGHT) {
  	    att= MAX_WEIGHT;
  	    throw new BadAttException("The weight: " + weight + " is larger than MAX_WEIGHT=" + MAX_WEIGHT,0,0);          
          } 
+         */
        }
      }

[Jboost-cvs] jboost/src/jboost/examples AttributeDescription.java, 1.3, 1.3.4.1 Example.java, 1.2,

[Jboost-cvs] jboost/src/jboost/examples AttributeDescription.java, 1.3, 1.3.4.1 Example.java, 1.2, 1.2.2.1 ExampleDescription.java, 1.2, 1.2.4.1 ExampleSet.java, 1.4, 1.4.2.1 LabelDescription.java, 1.1.1.1, 1.1.1.1.4.1 TextDescription.java, 1.2, 1.2.4.1 WeightDescription.java, 1.2, 1.2.4.1