Update of /cvsroot/jboost/jboost/scripts
In directory sc8-pr-cvs17.sourceforge.net:/tmp/cvs-serv21955/scripts
Modified Files:
VisualizeScores.py
Log Message:
VisualizeScores.py is working.
Index: VisualizeScores.py
===================================================================
RCS file: /cvsroot/jboost/jboost/scripts/VisualizeScores.py,v
retrieving revision 1.2
retrieving revision 1.3
diff -C2 -d -r1.2 -r1.3
*** VisualizeScores.py 3 Sep 2008 18:37:32 -0000 1.2
--- VisualizeScores.py 9 Sep 2008 20:43:25 -0000 1.3
***************
*** 1,55 ****
! import sys,os,os.path,re,math
import jarray
! filename = '/Users/yoavfreund/Desktop/Galit_Lahav/Raw_tifs/28/jboost/t28.0/ADD_ALL/trial0.test.boosting.info'
#args = sys.argv[1:]
#if len(args) != 1:
! # sys.exit('Usage: ParseTree <name>.output.tree')
#filename = args[0]
- infile = open(filename,'r')
-
header_p = re.compile('iteration=(\d+): elements=(\d+):')
scoreline_p = re.compile('([-+\d.]+):\s+') #([+-1]+):')
for line in infile:
- #print line
[(iter,elements)] = header_p.findall(line)
- iter=int(iter)
elements = int(elements)
! # print "iter=%d elements=%d\n" % (iter,elements)
! indexes=[]
! scores=[]
! labels=[]
for count in range(elements):
line=infile.readline()
- #print line
- a = scoreline_p.findall(line)
- [index,margin,score,label]=a
- #[index,margin,score,x1,x2,label]=a
- indexes.append(int(index))
- scores.append(float(score))
- labels.append(int(label))
- #print "index=%d, score=%f, label=%d\n" % (index,score,label)
- #if index>10:
- # break
! print len(indexes)
! jindexes = jarray.array(indexes,'i')
! jscores = jarray.array(scores,'d')
! jlabels = jarray.array(labels,'i')
! print jscores[3:30]
! print jlabels[3:30]
! if iter==20:
! break
! import jboost.visualization
! d=jboost.visualization.DataSet(jindexes,jscores,jlabels)
! print d.getMin()
! v=jboost.visualization.HistogramFrame(d)
! v.show()
!
!
--- 1,80 ----
! import sys,os,os.path,re,math,glob
import jarray
+ from java.util import Vector
! info_path = '/Users/yoavfreund/Desktop/Galit_Lahav/Raw_tifs/28/jboost/t28.0/ADD_ALL/'
#args = sys.argv[1:]
#if len(args) != 1:
! # sys.exit("""
! # Usage: VisualizeScore <info-files-path>
! # info-file-path is a directory containing files with names like trial0.test.boosting.info, trial2.train.boosting.info ...
! # Example: VisualizeScore /Users/yoavfreund/Desktop/Galit_Lahav/Raw_tifs/28/jboost/t28.0/ADD_ALL/'
! # """)
#filename = args[0]
header_p = re.compile('iteration=(\d+): elements=(\d+):')
scoreline_p = re.compile('([-+\d.]+):\s+') #([+-1]+):')
+ #testfiles = glob.glob(info_path+"trial*.test.boosting.info")
+
+ testfiles = glob.glob("/Users/yoavfreund/Downloads/dc_boost_active_output/iter?/*.test.boosting.info")
+
+ indexes={}
+ scores={}
+ labels={}
+
+ #find the iteration indices
+
+ infile = open(testfiles[0],'r')
+ iterList=[]
+ iterDict={}
+ iterationIndex=0
for line in infile:
[(iter,elements)] = header_p.findall(line)
elements = int(elements)
!
! if iterDict.has_key(iter):
! sys.exit("data file "+testfiles[0]+" has two lists corresponding to iteration "+iter)
! iterList.append(iter)
! iterDict[iter]=iterationIndex
! iterationIndex=iterationIndex+1
!
for count in range(elements):
line=infile.readline()
! from jboost.visualization import DataSet,DataElement,HistogramFrame
! d=DataSet(iterList)
! # read the data into the Dataset data structures.
! for filename in testfiles:
! print filename
! infile = open(filename,'r')
! iterList=[];
! for line in infile:
! print line
! [(iter,elements)] = header_p.findall(line)
! iterationIndex=iterDict[iter]
! elements = int(elements)
! print "iter=%s iterationIndex=%d elements=%d\n" % (iter,iterationIndex, elements)
! for count in range(elements):
! line=infile.readline()
! #print line
! a = scoreline_p.findall(line)
! index=int(a[0])
! score=float(a[2])
! label=int(a[-1])
! e=DataElement(score,index,label)
! d.addDataElement(e,iterationIndex)
!
! print "going to preprocess\n"
! d.preProcessDataset()
! print "finisehd preprocessing\n"
!
! print "min= %f, max=%f\n" % (d.getMin(),d.getMax())
!
! v=HistogramFrame(d)
!
! v.show()
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