I have my windows machine set to autoraise windows when the cursor passes over them (in Windows 7, type "change how" in the start menu search, select the "Change how your mouse works" item, and check the checkbox for "Activate a window by hovering over it with the mouse".)
But when I hover over Jabref when another window is covering part of it, the Jabref window doesn't raise. Instead, the Jabref icon on the taskbar is shaded yellow and flashes. If I manually click the Jabref window, then it does raise and the taskbar icon yellow color goes away.
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