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File Date Author Commit
 01_DataManagement 2025-10-22 kellgeor [r1798]
 02_ExpLog 2025-09-19 heinmatt [r1773] updated plotting for legibility - dethdomi
 03_Network 2024-03-18 dororoma [r1183]
 04_Calliope 2025-09-24 stroedua [r1775] get_eeg_times: fixed a typo and an error handli...
 05_LoadData 2025-10-08 hladret [r1792] ES: EEG check functions now sort stacks IDs in ...
 06_Library 2025-07-16 heinmatt [r1718] added cell browser to core code
 07_ViewStack 2024-10-31 lupoleon [r1431] just a minor change when using the small_figure...
 08_RoiQuest 2025-07-25 stroedua [r1725] RoiQuest: update to make ROIs work in single z-...
 09_Plugins 2024-06-12 dororoma [r1288] RoiQuest implementation of cellpose now does no...
 10_Behavior 2024-07-19 kellgeor [r1340]
 11_TwoPhoton 2025-10-22 kellgeor [r1798]
 12_Widefield 2025-10-03 dororoma [r1784] added option to output summary for the 2color data
 13_OII 2024-03-19 dororoma [r1186]
 20_MetaData 2025-07-23 kellgeor [r1723]
 21_Analysis 3 days ago dororoma [r1803] added framerate argument
 22_Plotting 2025-10-22 dororoma [r1797] added seedSize argument
 23_Prefs 2024-03-20 kellgeor [r1198]
 24_ProjMeta 5 days ago stroedua [r1802] generate_proj_meta.m: re-enabling the "raw_act"...
 98_TestingGround 2025-09-25 stroedua [r1777]
 99_Archive 2024-03-19 dororoma [r1185]
 Behavior 2024-05-08 kellgeor [r1269]
 Graphics 2025-07-23 kellgeor [r1723]
 ImageAlignment 2024-08-26 lupoleon [r1361] Added a .svnignore file and changed the propert...
 Library 2025-07-23 kellgeor [r1722]
 LoadSaveView 2025-05-28 kellgeor [r1681] added automatic monitoring of vectorDB
 OnlineAnalysis 2020-06-24 kellgeor [r666]
 Plugins 2025-05-26 kellgeor [r1679]
 ProjectMetaData 2025-07-16 heinmatt [r1718] added cell browser to core code
 ROIs 2024-12-05 lupoleon [r1478]
 Widefield 2024-11-05 lupoleon [r1444] moved to analysis_SAD again
 .svnignore 2024-08-26 lupoleon [r1361] Added a .svnignore file and changed the propert...
 README.md 2025-10-23 dororoma [r1799] Added README.md to the main repo to share downl...
 help.txt 2023-07-24 dororoma [r1057]
 init_path.m 2024-10-24 kellgeor [r1414]
 kalliope.mlapp 2025-06-11 kellgeor [r1693] added editing abilities to meta file documentation
 startup.m 2024-05-29 kellgeor [r1276]

Read Me

Calliope

Core code for preprocessing and managing data in the lab.

RoiQuest

Software for semi-automatically defining ROIs in two-photon and widefield recordings.
ROIs can be also detected using CellPose.
Pretrained models for 2P images used in the lab can be found here.

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