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File Date Author Commit
 01_DataManagement 2025-11-26 kellgeor [r1818]
 02_ExpLog 2025-09-19 heinmatt [r1773] updated plotting for legibility - dethdomi
 03_Network 2024-03-18 dororoma [r1183]
 04_Calliope 2025-09-24 stroedua [r1775] get_eeg_times: fixed a typo and an error handli...
 05_LoadData 2025-12-04 stroedua [r1825] ES: added another argument to control y positio...
 06_Library 2025-07-16 heinmatt [r1718] added cell browser to core code
 07_ViewStack 2024-10-31 lupoleon [r1431] just a minor change when using the small_figure...
 08_RoiQuest 2025-11-12 heinmatt [r1811] bugfix for wfSaveRois.m
 09_Plugins 2024-06-12 dororoma [r1288] RoiQuest implementation of cellpose now does no...
 10_Behavior 2024-07-19 kellgeor [r1340]
 11_TwoPhoton 2025-11-26 kellgeor [r1818]
 12_Widefield 4 days ago dororoma [r1826]
 13_OII 2024-03-19 dororoma [r1186]
 20_MetaData 2025-07-23 kellgeor [r1723]
 21_Analysis 1 day ago dororoma [r1827] threshold was too low
 22_Plotting 2025-11-20 stroedua [r1814] updating plotBSTRP to default to mean +- sd, in...
 23_Prefs 2024-03-20 kellgeor [r1198]
 24_ProjMeta 2025-11-27 stroedua [r1821] updated the file selection instruction to not l...
 98_TestingGround 8 hours ago kellgeor [r1828] HL: testing an update for register_widefield to...
 99_Archive 2024-03-19 dororoma [r1185]
 Behavior 2024-05-08 kellgeor [r1269]
 Graphics 2025-07-23 kellgeor [r1723]
 ImageAlignment 2024-08-26 lupoleon [r1361] Added a .svnignore file and changed the propert...
 Library 2025-07-23 kellgeor [r1722]
 LoadSaveView 2025-05-28 kellgeor [r1681] added automatic monitoring of vectorDB
 OnlineAnalysis 2020-06-24 kellgeor [r666]
 Plugins 2025-05-26 kellgeor [r1679]
 ProjectMetaData 2025-07-16 heinmatt [r1718] added cell browser to core code
 ROIs 2024-12-05 lupoleon [r1478]
 Widefield 2024-11-05 lupoleon [r1444] moved to analysis_SAD again
 .svnignore 2024-08-26 lupoleon [r1361] Added a .svnignore file and changed the propert...
 README.md 2025-10-23 dororoma [r1799] Added README.md to the main repo to share downl...
 help.txt 2023-07-24 dororoma [r1057]
 init_path.m 2024-10-24 kellgeor [r1414]
 kalliope.mlapp 2025-06-11 kellgeor [r1693] added editing abilities to meta file documentation
 startup.m 2024-05-29 kellgeor [r1276]

Read Me

Calliope

Core code for preprocessing and managing data in the lab.

RoiQuest

Software for semi-automatically defining ROIs in two-photon and widefield recordings.
ROIs can be also detected using CellPose.
Pretrained models for 2P images used in the lab can be found here.