ReleaseNotes

v0.7.31

• first official release; does not require a password

bps_v.07.7

• novel branch for invade; allows to test if insertions are positively selected by comparing TE frequency to frequency of TEs in reference regions.
• allows to specifiy reference regions (pseudo-small-RNA-sites in Kelleher et al. 2018)

v0.7.9

• bug fix for truncdeme (replicate count)
• output of truncations now for all, id, and fl

v0.7.8

• new feature: abort if too many insertions per diploid;
• improved status of population: base, ok, fail-0, fail-w, fail-inf

v0.7.6

• new feature: recombination rate may change within chromosomes
• --cluster-insertions now applies to the output column fwcli (thus fraction with the given amount of cluster-insertions); in previous releases fwcli always refered to 1)

v0.7.5

• new major feature; truncation deme stepping stone model

v0.6.6

• new feature: --replicate-offset; replicate counts may start with the given number; this allows for pseudo-parallelization by concatening the files from multiple simulation runs

v0.6.5

• fist stable release with all required features