From: Dag A. <dag...@mb...> - 2010-02-26 16:46:08
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Hi I am having difficulty installing infomap. I have tried on Mac OS X as well as Red Hat but never got past the make stage without errors. The Red hat machine has gdbm installed I get following errors (below). Any ideas what I should try? Would it be easier on Linux or Mac?? Sincerely, Dag Ahrén make[2]: Entering directory `/home/dag/lsa/infomap-nlp-0.8.5/svd' Making all in svdinterface make[3]: Entering directory `/home/dag/lsa/infomap-nlp-0.8.5/svd/svdinterface' if gcc -DHAVE_CONFIG_H -I. -I. -I../.. -I../../lib -I../../admin -g -O2 -MT las2.o -MD -MP -MF ".deps/las2.Tpo" -c -o las2.o las2.c; \ then mv -f ".deps/las2.Tpo" ".deps/las2.Po"; else rm -f ".deps/las2.Tpo"; exit 1; fi las2.c: In function ‘preparelandr’: las2.c:394: error: incompatible implicit declaration of function ‘mymalloc’ las2.c:305: error: previous implicit declaration of ‘mymalloc’ was here las2.c:394: warning: cast to pointer from integer of different size las2.c:395: warning: cast to pointer from integer of different size las2.c:396: warning: cast to pointer from integer of different size las2.c:397: warning: cast to pointer from integer of different size las2.c:398: warning: cast to pointer from integer of different size las2.c:399: warning: cast to pointer from integer of different size las2.c: In function ‘landr’: las2.c:779: error: incompatible implicit declaration of function ‘mymalloc’ las2.c:305: error: previous implicit declaration of ‘mymalloc’ was here las2.c:779: warning: cast to pointer from integer of different size las2.c:796: warning: cast to pointer from integer of different size las2.c:797: warning: cast to pointer from integer of different size las2.c: In function ‘ritvec’: las2.c:900: error: incompatible implicit declaration of function ‘mymalloc’ las2.c:305: error: previous implicit declaration of ‘mymalloc’ was here las2.c:900: warning: cast to pointer from integer of different size las2.c: In function ‘startv’: las2.c:1641: error: invalid storage class for function ‘random’ las2.c: At top level: las2.c:1718: error: conflicting types for ‘random’ las2.c:1652: error: previous implicit declaration of ‘random’ was here make[3]: *** [las2.o] Error 1 make[3]: Leaving directory `/home/dag/lsa/infomap-nlp-0.8.5/svd/svdinterface' make[2]: *** [all-recursive] Error 1 make[2]: Leaving directory `/home/dag/lsa/infomap-nlp-0.8.5/svd' make[1]: *** [all-recursive] Error 1 make[1]: Leaving directory `/home/dag/lsa/infomap-nlp-0.8.5' make: *** [all] Error 2 -- ************************************************* Dag Ahrén, Assistant Professor in Genomic Ecology Microbial Ecology Ecology Building, Lund University, Sweden Phone +46 46 222 3995 ************************************************* |