[infomap-nlp-users] infomap-build: Error 139 (segmentation fault)

[Amir H. J. <ami...@ya...>]

Hi,I'm using a latest version of infomap on OpenSuse11 x64.
It successfully make and install but following is a error message when running infomap-build command:amir-pc:/ # infomap-build -s /test/kjbible.txt sf
Sourcing param file "/usr/local/share/infomap-nlp/default-params"
Sourcing extra param file "/tmp/infomap-build.PVwib4"
Contents are:
Removing extra param file
WORKING_DATA_DIR = "/collections/infomap_models/sf"
CORPUS_DIR = "/test"
CORPUS_FILE = "/test/kjbible.txt"
FNAMES_FILE = ""
ROWS = "20000"
COLUMNS = "1000"
SINGVALS = "100"
SVD_ITER = "100"
PRE_CONTEXT_SIZE = "15"
POST_CONTEXT_SIZE = "15"
WRITE_MATLAB_FORMAT = "0"
VALID_CHARS_FILE = "/usr/local/share/infomap-nlp/valid_chars.en"
STOPLIST_FILE = "/usr/local/share/infomap-nlp/stop.list"
COL_LABELS_FROM_FILE = "0"
COL_LABEL_FILE = ""
echo "Making datadir"
Making datadir
mkdir -p /collections/infomap_models/sf

==================================================
Building target: /collections/infomap_models/sf/wordlist
Prerequisites: /test/kjbible.txt
Mon Nov 3 12:05:43 EST 2008
..................................................
prepare_corpus \
                -cdir "/test" \
                -mdir "/collections/infomap_models/sf" \
                -cfile "/test/kjbible.txt" \
                -fnfile "" \
                -chfile "/usr/local/share/infomap-nlp/valid_chars.en" \
                -slfile "/usr/local/share/infomap-nlp/stop.list" \
                -rptfile ""
Locale set to en_US.
Opening File for "r":
        "/usr/local/share/infomap-nlp/valid_chars.en"
Opening File for "r":
        ""
my_fopen: No such file or directory
Opening File for "r":
        "/usr/local/share/infomap-nlp/stop.list"
Opening File for "w":
        "/collections/infomap_models/sf/wordlist"
Opening File for "r":
        "/test/kjbible.txt"
Opening File for "w":
        "/collections/infomap_models/sf/numDocs"
Typecount = 12805
Preparing to sort ... Sorting ... Done.
Opening File for "w":
        "/collections/infomap_models/sf/dic"
..................................................
Finishing target: /collections/infomap_models/sf/wordlist
==================================================


==================================================
Building target: /collections/infomap_models/sf/coll
Prerequisites: /collections/infomap_models/sf/wordlist /collections/infomap_models/sf/dic /collections/infomap_models/sf/numDocs
Mon Nov 3 12:05:43 EST 2008
..................................................
count_wordvec \
                -mdir /collections/infomap_models/sf \
                -matlab 0 \
                -precontext 15 \
                -postcontext 15 \
                -rows 20000 \
                -columns 1000 \
                -col_labels_from_file 0 \
                -col_label_file ""
model data dir is "/collections/infomap_models/sf".
count_wordvec.c: looking for 12805 rows
which had better match 12805
Reading the dictionary... Opening File for "r":
        "/collections/infomap_models/sf/dic"
Opening File for "r":
        "/collections/infomap_models/sf/numDocs"
Initializing row indices...Done.
Initializing column indices...Done.
Allocating matrix memory...done.
Initializing matrix...done.
model data dir is "/collections/infomap_models/sf".
count_wordvec.c: about to call process_wordlist
Entering process_wordlist.
About to call initialize_wordlist.
Opening File for "r":
        "/collections/infomap_models/sf/wordlist"
Returned from initialize_wordlist.
Writing the co-occurrence matrix.
Entering write_matrix_svd; rows = 12805 and columns = 1000.
Opening File for "w":
        "/collections/infomap_models/sf/coll"
Opening File for "w":
        "/collections/infomap_models/sf/indx"
..................................................
Finishing target: /collections/infomap_models/sf/coll
==================================================


==================================================
Building target: /collections/infomap_models/sf/left
Prerequisites: /collections/infomap_models/sf/coll /collections/infomap_models/sf/indx
Mon Nov 3 12:05:45 EST 2008
..................................................
cd /collections/infomap_models/sf && rm -f svd_diag left \
                                rght sing
cd /collections/infomap_models/sf && svdinterface \
                -singvals 100 \
                -iter 100

  This is svdinterface.

  Writing to: left
  Writing to: rght
  Writing to: sing
  Writing to: svd_diag
  Reading: indx
  Reading: indx
  Reading: coll
/bin/sh: line 2:  8375 Segmentation fault      svdinterface -singvals 100 -iter 100
make: *** [/collections/infomap_models/sf/left] Error 139 


Thanks in advance.
Regard,----------------------------------- 
Amir Hossein Jadidinejad 
Master of Computer Science 
Islamic Azad University, Iran 
Home Page: http://jadidi.info  E-Mail : am...@ja... , 
          ami...@ya...