Re: [infomap-nlp-users] problem getting infomap-build working fsign error

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Dear Rosario,

Another user, Sverker Siktrom (sve...@lu...) posted about
an fsign problem, and then wrote back to say the problem had gone away.
http://sourceforge.net/mailarchive/message.php?msg_id=5.1.0.14.2.20070119214127.0301ee60%40pop.lu.se

I don't know if there's anything particular that Sverker did to fix the
problem, you may try writing to him.

I've also recently been working on a new SemanticVectors pakage, which
is at http://code.google.com/p/semanticvectors/
So far there have been no installation or build problems reported at all,
so you may consider trying out this package and seeing if it meets your
needs.

Best wishes,
Dominic

On Thu, 8 Nov 2007, Rosa Figueroa wrote:

> Hi,
>
> I was trying to run infomap-build and I get a fsign error
>
> ./infomap-build -s /curie/home/rosfigue/infomap/corpora/MED1.txt med2
>
> Sourcing param file
> "/curie/home/rosfigue/infomap/install/share/infomap-nlp/default-params"
> Sourcing extra param file "/tmp/infomap-build.m12767"
> Contents are:
> Removing extra param file
> WORKING_DATA_DIR = "/curie/home/rosfigue/infomap/install/med2"
> CORPUS_DIR = "/curie/home/rosfigue/infomap/corpora"
> CORPUS_FILE = "/curie/home/rosfigue/infomap/corpora/MED1.txt"
> FNAMES_FILE = ""
> ROWS = "20000"
> COLUMNS = "1000"
> SINGVALS = "100"
> SVD_ITER = "100"
> PRE_CONTEXT_SIZE = "15"
> POST_CONTEXT_SIZE = "15"
> WRITE_MATLAB_FORMAT = "0"
> VALID_CHARS_FILE =
> "/curie/home/rosfigue/infomap/install/share/infomap-nlp/valid_chars.en"
> STOPLIST_FILE =
> "/curie/home/rosfigue/infomap/install/share/infomap-nlp/stop.list"
> COL_LABELS_FROM_FILE = "0"
> COL_LABEL_FILE = ""
> echo "Making datadir"
> Making datadir
> mkdir -p /curie/home/rosfigue/infomap/install/med2
>
> ==================================================
> Building target: /curie/home/rosfigue/infomap/install/med2/wordlist
> Prerequisites: /curie/home/rosfigue/infomap/corpora/MED1.txt
> Thu Nov 8 16:07:17 EST 2007
> ..................................................
> prepare_corpus \
> -cdir "/curie/home/rosfigue/infomap/corpora" \
>         -mdir "/curie/home/rosfigue/infomap/install/med2" \
>         -cfile "/curie/home/rosfigue/infomap/corpora/MED1.txt" \
>         -fnfile "" \
>         -chfile
> "/curie/home/rosfigue/infomap/install/share/infomap-nlp/valid_chars.en"
> \
>         -slfile
> "/curie/home/rosfigue/infomap/install/share/infomap-nlp/stop.list" \
>         -rptfile ""
> Locale set to en_US.
> Opening File for "r":
>         "/curie/home/rosfigue/infomap/install/share/infomap-nlp/valid_chars.en"
> Opening File for "r":
>         ""
> my_fopen: No such file or directory
> Opening File for "r":
>         "/curie/home/rosfigue/infomap/install/share/infomap-nlp/stop.list"
> Opening File for "w":
>         "/curie/home/rosfigue/infomap/install/med2/wordlist"
> Opening File for "r":
>         "/curie/home/rosfigue/infomap/corpora/MED1.txt"
> Opening File for "w":
>         "/curie/home/rosfigue/infomap/install/med2/numDocs"
> Typecount = 12653
> Preparing to sort ... Sorting ... Done.
> Opening File for "w":
>         "/curie/home/rosfigue/infomap/install/med2/dic"
> ..................................................
> Finishing target: /curie/home/rosfigue/infomap/install/med2/wordlist
> ==================================================
>
>
> ==================================================
> Building target: /curie/home/rosfigue/infomap/install/med2/coll
> Prerequisites: /curie/home/rosfigue/infomap/install/med2/wordlist
> /curie/home/rosfigue/infomap/install/med2/dic
> /curie/home/rosfigue/infomap/install/med2/numDocs
> Thu Nov 8 16:07:17 EST 2007
> ..................................................
> count_wordvec \
> -mdir /curie/home/rosfigue/infomap/install/med2 \
> -matlab 0 \
> -precontext 15 \
> -postcontext 15 \
> -rows 20000 \
> -columns 1000 \
> -col_labels_from_file 0 \
> -col_label_file ""
> model data dir is "/curie/home/rosfigue/infomap/install/med2".
> count_wordvec.c: looking for 12653 rows
> which had better match 12653
> Reading the dictionary... Opening File for "r":
>         "/curie/home/rosfigue/infomap/install/med2/dic"
> Opening File for "r":
>         "/curie/home/rosfigue/infomap/install/med2/numDocs"
> Initializing row indices...Done.
> Initializing column indices...Done.
> Allocating matrix memory...done.
> Initializing matrix...done.
> model data dir is "/curie/home/rosfigue/infomap/install/med2".
> count_wordvec.c: about to call process_wordlist
> Entering process_wordlist.
> About to call initialize_wordlist.
> Opening File for "r":
>         "/curie/home/rosfigue/infomap/install/med2/wordlist"
> Returned from initialize_wordlist.
> Writing the co-occurrence matrix.
> Entering write_matrix_svd; rows = 12653 and columns = 1000.
> Opening File for "w":
>         "/curie/home/rosfigue/infomap/install/med2/coll"
> Opening File for "w":
>         "/curie/home/rosfigue/infomap/install/med2/indx"
> ..................................................
> Finishing target: /curie/home/rosfigue/infomap/install/med2/coll
> ==================================================
>
>
> ==================================================
> Building target: /curie/home/rosfigue/infomap/install/med2/left
> Prerequisites: /curie/home/rosfigue/infomap/install/med2/coll
> /curie/home/rosfigue/infomap/install/med2/indx
> Thu Nov 8 16:07:20 EST 2007
> ..................................................
> cd /curie/home/rosfigue/infomap/install/med2 && rm -f svd_diag left \
>                         rght sing
> cd /curie/home/rosfigue/infomap/install/med2 && svdinterface \
>         -singvals 100 \
>         -iter 100
>
>   This is svdinterface.
>
>   Writing to: left
>   Writing to: rght
>   Writing to: sing
>   Writing to: svd_diag
>   Reading: indx
>   Reading: indx
>   Reading: coll
>
>
>   ERROR:
>
>   fsign
>
> make: *** [/curie/home/rosfigue/infomap/install/med2/left] Error 1
>
> help me please
>
> Thanks
>
> Rosa
>
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