[infomap-nlp-users] problem getting infomap-build working fsign error

[Rosa F. <ros...@gm...>]

Hi,

I was trying to run infomap-build and I get a fsign error

./infomap-build -s /curie/home/rosfigue/infomap/corpora/MED1.txt med2

Sourcing param file
"/curie/home/rosfigue/infomap/install/share/infomap-nlp/default-params"
Sourcing extra param file "/tmp/infomap-build.m12767"
Contents are:
Removing extra param file
WORKING_DATA_DIR = "/curie/home/rosfigue/infomap/install/med2"
CORPUS_DIR = "/curie/home/rosfigue/infomap/corpora"
CORPUS_FILE = "/curie/home/rosfigue/infomap/corpora/MED1.txt"
FNAMES_FILE = ""
ROWS = "20000"
COLUMNS = "1000"
SINGVALS = "100"
SVD_ITER = "100"
PRE_CONTEXT_SIZE = "15"
POST_CONTEXT_SIZE = "15"
WRITE_MATLAB_FORMAT = "0"
VALID_CHARS_FILE =
"/curie/home/rosfigue/infomap/install/share/infomap-nlp/valid_chars.en"
STOPLIST_FILE =
"/curie/home/rosfigue/infomap/install/share/infomap-nlp/stop.list"
COL_LABELS_FROM_FILE = "0"
COL_LABEL_FILE = ""
echo "Making datadir"
Making datadir
mkdir -p /curie/home/rosfigue/infomap/install/med2

==================================================
Building target: /curie/home/rosfigue/infomap/install/med2/wordlist
Prerequisites: /curie/home/rosfigue/infomap/corpora/MED1.txt
Thu Nov 8 16:07:17 EST 2007
..................................................
prepare_corpus \
-cdir "/curie/home/rosfigue/infomap/corpora" \
        -mdir "/curie/home/rosfigue/infomap/install/med2" \
        -cfile "/curie/home/rosfigue/infomap/corpora/MED1.txt" \
        -fnfile "" \
        -chfile
"/curie/home/rosfigue/infomap/install/share/infomap-nlp/valid_chars.en"
\
        -slfile
"/curie/home/rosfigue/infomap/install/share/infomap-nlp/stop.list" \
        -rptfile ""
Locale set to en_US.
Opening File for "r":
        "/curie/home/rosfigue/infomap/install/share/infomap-nlp/valid_chars.en"
Opening File for "r":
        ""
my_fopen: No such file or directory
Opening File for "r":
        "/curie/home/rosfigue/infomap/install/share/infomap-nlp/stop.list"
Opening File for "w":
        "/curie/home/rosfigue/infomap/install/med2/wordlist"
Opening File for "r":
        "/curie/home/rosfigue/infomap/corpora/MED1.txt"
Opening File for "w":
        "/curie/home/rosfigue/infomap/install/med2/numDocs"
Typecount = 12653
Preparing to sort ... Sorting ... Done.
Opening File for "w":
        "/curie/home/rosfigue/infomap/install/med2/dic"
..................................................
Finishing target: /curie/home/rosfigue/infomap/install/med2/wordlist
==================================================


==================================================
Building target: /curie/home/rosfigue/infomap/install/med2/coll
Prerequisites: /curie/home/rosfigue/infomap/install/med2/wordlist
/curie/home/rosfigue/infomap/install/med2/dic
/curie/home/rosfigue/infomap/install/med2/numDocs
Thu Nov 8 16:07:17 EST 2007
..................................................
count_wordvec \
-mdir /curie/home/rosfigue/infomap/install/med2 \
-matlab 0 \
-precontext 15 \
-postcontext 15 \
-rows 20000 \
-columns 1000 \
-col_labels_from_file 0 \
-col_label_file ""
model data dir is "/curie/home/rosfigue/infomap/install/med2".
count_wordvec.c: looking for 12653 rows
which had better match 12653
Reading the dictionary... Opening File for "r":
        "/curie/home/rosfigue/infomap/install/med2/dic"
Opening File for "r":
        "/curie/home/rosfigue/infomap/install/med2/numDocs"
Initializing row indices...Done.
Initializing column indices...Done.
Allocating matrix memory...done.
Initializing matrix...done.
model data dir is "/curie/home/rosfigue/infomap/install/med2".
count_wordvec.c: about to call process_wordlist
Entering process_wordlist.
About to call initialize_wordlist.
Opening File for "r":
        "/curie/home/rosfigue/infomap/install/med2/wordlist"
Returned from initialize_wordlist.
Writing the co-occurrence matrix.
Entering write_matrix_svd; rows = 12653 and columns = 1000.
Opening File for "w":
        "/curie/home/rosfigue/infomap/install/med2/coll"
Opening File for "w":
        "/curie/home/rosfigue/infomap/install/med2/indx"
..................................................
Finishing target: /curie/home/rosfigue/infomap/install/med2/coll
==================================================


==================================================
Building target: /curie/home/rosfigue/infomap/install/med2/left
Prerequisites: /curie/home/rosfigue/infomap/install/med2/coll
/curie/home/rosfigue/infomap/install/med2/indx
Thu Nov 8 16:07:20 EST 2007
..................................................
cd /curie/home/rosfigue/infomap/install/med2 && rm -f svd_diag left \
                        rght sing
cd /curie/home/rosfigue/infomap/install/med2 && svdinterface \
        -singvals 100 \
        -iter 100

  This is svdinterface.

  Writing to: left
  Writing to: rght
  Writing to: sing
  Writing to: svd_diag
  Reading: indx
  Reading: indx
  Reading: coll


  ERROR:

  fsign

make: *** [/curie/home/rosfigue/infomap/install/med2/left] Error 1

help me please

Thanks

Rosa