Re: [infomap-nlp-users] infomap-nlp-users Digest, Vol 3, Issue 2

SourceForge Headquarters 1320 Columbia Street Suite 310 San Diego, CA 92101 +1 (858) 422-6466

Dear Henry,

I just installed Infomap under a Windows/cygwin-environment, and it=20
worked without any complaints.

I think you have tried installing gdbm independently from cygwin, so it=20
cannot be found at the expected paths.
Try to re-setup cygwin. In the installation process you can choose the=20
packages to be installed. Check in "Base" or "Devel" if "gdbm" is=20
already selected, moreover check if the c (not only the c++) version of=20
gcc and "binutils" are selected.
If this doesn't help, check if all paths are correct. I did not have to=20
modify anything, since I have installed cygwin at root (C:/), but this=20
is a probable source of problems.

By the way, if you have to adapt any paths, do not use the colon (MAKE=20
does not process it correctly). For "C:" use "/cygdrive/c".

Hope it helps!

Good luck,

Tonio

inf...@li... wrote:
> Send infomap-nlp-users mailing list submissions to
> 	inf...@li...
>=20
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>=20
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> When replying, please edit your Subject line so it is more specific
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>=20
>=20
> Today's Topics:
>=20
>    1. Fwd: Re:  Installation of infomap (Henry Ip [LIB])
>    2. Re: Fwd: Re:  Installation of infomap (Dominic Widdows)
>=20
>=20
> ----------------------------------------------------------------------
>=20
> Message: 1
> Date: Thu, 17 Aug 2006 16:47:43 +0800
> From: "Henry Ip [LIB]" <lb...@in...>
> Subject: [infomap-nlp-users] Fwd: Re:  Installation of infomap
> To: inf...@li...
> Message-ID: <200...@in...>
> Content-Type: text/plain; charset=3D"big5"
>=20
> Dear Sir,=20
>=20
> I have tried to install the GDBM. However, it seems to have problems.
> Is it related to the cygwin? Or any other issues?
>=20
> Please help.
> Thanks,
> Henry
>=20
>>>> Henry Ip [LIB] 17/8/2006 04:04 >>>
>=20
> Dear Sir,
>=20
> Thanks for your promt response.
> I decided to use Windows platform with Cygwin software.=20
> I have try the configure but still have problems. It seems to be a miss=
ing dbm.
> Any suggestion for this kind of problems?
> P.S. Please check the output file from my computer.
>=20
> Thanks,
> Henry
>=20
>>>> Dominic Widdows <wi...@ma...> 16/8/2006 08:24 >>>
>=20
> Dear Henry,
>=20
> I hope we can help with some of these things, though it sounds as =20
> though it will need some work.
>=20
>> Dear Sir/Madam,
>>
>> I am interested for the infomap project and I would like to =20
>> launched the demo.
>> However, I have difficulty when I am installing it.
>> like checking whether we are cross compiling... no,checking for =20
>> stdint.h... no etc.
>> How can I solve these kind of problem and can successfully install =20
>> the software.
>=20
> Is this the output from running "./configure"? I would expect headers =20
> like "stdint.h" to come with gcc (I might be wrong). Did your =20
> configure script find the gcc compiler successfully?
>=20
> It would help if you were to send the whole output from "./configure" =20
> appended if you reply to this message.
>=20
>> Also, how can I associate the web server to the software, I cannot =20
>> find it mention on the document.
>=20
> We recently added the Perl/CGI tools that you can use to set up a web =20
> interface. However, you need to check them out from the CVS =20
> repository, they're not part of the standard distribution, because =20
> they aren't very portable at all yet - you'll have to figure out =20
> pathnames, etc. The first time we added these people were having =20
> trouble getting them from CVS, though I think that was to do with the =20
> SourceForge CVS upgrade since it seems to have been working since.
>=20
>> Any windows version available?
>=20
> The Infomap software compiles under Windows using Cygwin (this has =20
> generally worked pretty reliably). There is a Windows front end that =20
> another contributor on the list made and kindly shared with other =20
> users - I'll try and find it in the archive at some point though I =20
> have to run now ;-)
>=20
> Best wishes,
> Dominic
>=20
>> Thanks ,
>> Henry
>> ----------------------------------------------------------------------=
=20
>> ---
>> Using Tomcat but need to do more? Need to support web services, =20
>> security?
>> Get stuff done quickly with pre-integrated technology to make your =20
>> job easier
>> Download IBM WebSphere Application Server v.1.0.1 based on Apache =20
>> Geronimo
>> http://sel.as-us.falkag.net/sel?=20
>> cmd=3Dlnk&kid=3D120709&bid=3D263057&dat=3D121642______________________=
________=20
>> _________________
>> infomap-nlp-users mailing list
>> inf...@li...
>> https://lists.sourceforge.net/lists/listinfo/infomap-nlp-users
>>
> -------------- next part --------------
> An HTML attachment was scrubbed...
> URL: http://sourceforge.net/mailarchive/forum.php?forum=3Dinfomap-nlp-u=
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> -------------- next part --------------
> $ ./configure
> checking for a BSD-compatible install... /usr/bin/install -c
> checking whether build environment is sane... yes
> checking for gawk... gawk
> checking whether make sets $(MAKE)... yes
> checking for gcc... gcc
> checking for C compiler default output file name... a.exe
> checking whether the C compiler works... yes
> checking whether we are cross compiling... no
> checking for suffix of executables... .exe
> checking for suffix of object files... o
> checking whether we are using the GNU C compiler... yes
> checking whether gcc accepts -g... yes
> checking for gcc option to accept ANSI C... none needed
> checking for style of include used by make... GNU
> checking dependency style of gcc... gcc
> checking how to run the C preprocessor... gcc -E
> checking for a BSD-compatible install... /usr/bin/install -c
> checking whether make sets $(MAKE)... (cached) yes
> checking for sqrt in -lm... yes
> checking for dbm_open in -lgdbm... no
> checking for dbm_open in -lgdbm_compat... no
> checking for egrep... grep -E
> checking for ANSI C header files... yes
> checking for sys/types.h... yes
> checking for sys/stat.h... yes
> checking for stdlib.h... yes
> checking for string.h... yes
> checking for memory.h... yes
> checking for strings.h... yes
> checking for inttypes.h... no
> checking for stdint.h... no
> checking for unistd.h... yes
> checking fcntl.h usability... yes
> checking fcntl.h presence... yes
> checking for fcntl.h... yes
> checking locale.h usability... yes
> checking locale.h presence... yes
> checking for locale.h... yes
> checking for stdlib.h... (cached) yes
> checking for string.h... (cached) yes
> checking sys/file.h usability... yes
> checking sys/file.h presence... yes
> checking for sys/file.h... yes
> checking sys/time.h usability... yes
> checking sys/time.h presence... yes
> checking for sys/time.h... yes
> checking for unistd.h... (cached) yes
> checking ndbm.h usability... no
> checking ndbm.h presence... no
> checking for ndbm.h... no
> checking gdbm/ndbm.h usability... no
> checking gdbm/ndbm.h presence... no
> checking for gdbm/ndbm.h... no
> configure: WARNING: configure has detected that you do not have an
>                         appropriate ndbm header file installed on your
>                         system.  Compilation cannot proceed.  Please in=
stall
>                         ndbm.h or gdbm/ndbm.h on your system, or write =
to
>                         inf...@li... for adv=
ice.
> checking for an ANSI C-conforming const... yes
> checking for off_t... yes
> checking for size_t... yes
> checking for stdlib.h... (cached) yes
> checking for GNU libc compatible malloc... yes
> checking whether lstat dereferences a symlink specified with a trailing=
 slas
>  no
> checking whether stat accepts an empty string... yes
> checking for getcwd... yes
> checking for memset... yes
> checking for setlocale... yes
> checking for sqrt... yes
> checking for strchr... yes
> checking for strdup... yes
> checking for strstr... yes
> checking for dbm_open... no
> checking for dbm_close... no
> checking for dbm_fetch... no
> checking for dbm_store... no
> configure: WARNING: configure could not find all of the necessary DBM f=
uncti
>=20
>                  (dbm_open, dbm_close, dbm_fetch, dbm_store).  This pro=
bably
>                  means that configure could not find your DBM library, =
or
>                  that you do not have a DBM library installed.  (See ab=
ove
>                  output for the results of library checks.)  Please ins=
tall
>                  a DBM-compatible library (such as GNU DBM) or write to
>                  inf...@li... for advice.
> configure: error: One or more errors found (see output above for detail=
s).
>                  Configuration unsuccessful.
> -------------- next part --------------
> lbsc@lbip ~/gdbm-1.8.3/gdbm-1.8.3
> $ ./configure
> checking for gcc... gcc
> checking for C compiler default output... a.exe
> checking whether the C compiler works... yes
> checking whether we are cross compiling... no
> checking for suffix of executables... .exe
> checking for suffix of object files... o
> checking whether we are using the GNU C compiler... yes
> checking whether gcc accepts -g... yes
> checking for gcc option to accept ANSI C... none needed
> checking how to run the C preprocessor... gcc -E
> checking for a BSD-compatible install... /usr/bin/install -c
> checking build system type... i686-pc-cygwin
> checking host system type... i686-pc-cygwin
> checking for ld used by GCC... c:/djgpp/bin/ld.exe
> checking if the linker (c:/djgpp/bin/ld.exe) is GNU ld... yes
> checking for c:/djgpp/bin/ld.exe option to reload object files... -r
> checking for BSD-compatible nm... /cygdrive/c/djgpp/bin/nm -B
> checking whether ln -s works... yes
> checking how to recognise dependant libraries... file_magic file format=
 pei*-i3
> 6(.*architecture: i386)?
> checking command to parse /cygdrive/c/djgpp/bin/nm -B output... failed
> checking for egrep... grep -E
> checking for ANSI C header files... yes
> checking for sys/types.h... yes
> checking for sys/stat.h... yes
> checking for stdlib.h... yes
> checking for string.h... yes
> checking for memory.h... yes
> checking for strings.h... yes
> checking for inttypes.h... no
> checking for stdint.h... no
> checking for unistd.h... yes
> checking dlfcn.h usability... no
> checking dlfcn.h presence... no
> checking for dlfcn.h... no
> checking for ranlib... ranlib
> checking for strip... strip
> checking for objdir... .libs
> checking for gcc option to produce PIC... -DDLL_EXPORT
> checking if gcc PIC flag -DDLL_EXPORT works... yes
> checking if gcc static flag -static works... yes
> checking if gcc supports -c -o file.o... yes
> checking if gcc supports -c -o file.lo... yes
> checking if gcc supports -fno-rtti -fno-exceptions... yes
> checking whether the linker (c:/djgpp/bin/ld.exe) supports shared libra=
ries...
> es
> checking how to hardcode library paths into programs... immediate
> checking whether stripping libraries is possible... yes
> checking dynamic linker characteristics... Win32 ld.exe
> checking if libtool supports shared libraries... yes
> checking whether to build shared libraries... yes
> checking whether to build static libraries... yes
> creating libtool
> checking for an ANSI C-conforming const... yes
> checking for stdlib.h... (cached) yes
> checking for string.h... (cached) yes
> checking sys/file.h usability... yes
> checking sys/file.h presence... yes
> checking for sys/file.h... yes
> checking for unistd.h... (cached) yes
> checking fcntl.h usability... yes
> checking fcntl.h presence... yes
> checking for fcntl.h... yes
> checking for sys/types.h... (cached) yes
> checking memory.y usability... no
> checking memory.y presence... no
> checking for memory.y... no
> checking for main in -ldbm... no
> checking for main in -lndbm... no
> checking for rename... yes
> checking for ftruncate... yes
> checking for flock... no
> checking for bcopy... yes
> checking for fsync... yes
> checking for getopt... yes
> checking for off_t... yes
> checking for struct stat.st_blksize... yes
> configure: creating ./config.status
> config.status: creating Makefile
> config.status: creating autoconf.h
> config.status: autoconf.h is unchanged
>=20
>=20
> Then show the follow once i type the command "make"
>=20
>=20
> lbsc@lbip ~/gdbm-1.8.3/gdbm-1.8.3
> $ make
> C:/cygwin/bin/sh.exe ./libtool --mode=3Dcompile gcc -c   -I. -I. -g -O2=
 gdbmopen.c
>=20
>       6 [main] sh 2288 dtable::stdio_init: couldn't make stderr distinc=
t from st
> dout
> rm -f .libs/gdbmopen.lo
> gcc -c -I. -I. -g -O2 gdbmopen.c  -DDLL_EXPORT -DPIC -o .libs/gdbmopen.=
lo
> Microsoft(R) Windows DOS
> (C)Copyright Microsoft Corp 1990-2001.
> gcc -c -I. -I. -g -O2 gdbmopen.c -o gdbmopen.o >/dev/null 2>&1
> mv -f .libs/gdbmopen.lo gdbmopen.lo
> C:/cygwin/bin/sh.exe ./libtool --mode=3Dcompile gcc -c   -I. -I. -g -O2=
 gdbmdelete
> c
>       5 [main] sh 112 dtable::stdio_init: couldn't make stderr distinct=
 from std
> out
> rm -f .libs/gdbmdelete.lo
> gcc -c -I. -I. -g -O2 gdbmdelete.c  -DDLL_EXPORT -DPIC -o .libs/gdbmdel=
ete.lo
> Microsoft(R) Windows DOS
> (C)Copyright Microsoft Corp 1990-2001.
> make.exe: *** [gdbmdelete.lo] Error 1
>=20
> ------------------------------
>=20
> Message: 2
> Date: Thu, 17 Aug 2006 08:48:30 -0400
> From: Dominic Widdows <wi...@ma...>
> Subject: Re: [infomap-nlp-users] Fwd: Re:  Installation of infomap
> To: "Henry Ip [LIB]" <lb...@in...>
> Cc: inf...@li...
> Message-ID: <B86...@ma...>
> Content-Type: text/plain; charset=3D"us-ascii"
>=20
> Hi Henry,
>=20
> I'm afraid you're getting beyond my competence here, though hopefully =20
> one of the more dedicated Windows / Cygwin users can help you out. I =20
> have only ever installed gdbm on Windows using the Cygwin package =20
> manager GUI, and it's generally "just worked" without my having to =20
> intervene at the command line. Have you tried the package manager? If =20
> you're missing uninstalled dependencies it should help.
>=20
> Best wishes,
> Dominic
>=20
> On Aug 17, 2006, at 4:47 AM, Henry Ip [LIB] wrote:
>=20
>> Dear Sir,
>>
>> I have tried to install the GDBM. However, it seems to have problems.
>> Is it related to the cygwin? Or any other issues?
>>
>> Please help.
>> Thanks,
>> Henry
>>
>>>>> Henry Ip [LIB] 17/8/2006 04:04 >>>
>> Dear Sir,
>>
>> Thanks for your promt response.
>> I decided to use Windows platform with Cygwin software.
>> I have try the configure but still have problems. It seems to be a =20
>> missing dbm.
>> Any suggestion for this kind of problems?
>> P.S. Please check the output file from my computer.
>>
>> Thanks,
>> Henry
>>
>>>>> Dominic Widdows <wi...@ma...> 16/8/2006 08:24 >>>
>> Dear Henry,
>>
>> I hope we can help with some of these things, though it sounds as
>> though it will need some work.
>>
>>> Dear Sir/Madam,
>>>
>>> I am interested for the infomap project and I would like to
>>> launched the demo.
>>> However, I have difficulty when I am installing it.
>>> like checking whether we are cross compiling... no,checking for
>>> stdint.h... no etc.
>>> How can I solve these kind of problem and can successfully install
>>> the software.
>> Is this the output from running "./configure"? I would expect headers
>> like "stdint.h" to come with gcc (I might be wrong). Did your
>> configure script find the gcc compiler successfully?
>>
>> It would help if you were to send the whole output from "./configure"
>> appended if you reply to this message.
>>
>>> Also, how can I associate the web server to the software, I cannot
>>> find it mention on the document.
>> We recently added the Perl/CGI tools that you can use to set up a web
>> interface. However, you need to check them out from the CVS
>> repository, they're not part of the standard distribution, because
>> they aren't very portable at all yet - you'll have to figure out
>> pathnames, etc. The first time we added these people were having
>> trouble getting them from CVS, though I think that was to do with the
>> SourceForge CVS upgrade since it seems to have been working since.
>>
>>> Any windows version available?
>> The Infomap software compiles under Windows using Cygwin (this has
>> generally worked pretty reliably). There is a Windows front end that
>> another contributor on the list made and kindly shared with other
>> users - I'll try and find it in the archive at some point though I
>> have to run now ;-)
>>
>> Best wishes,
>> Dominic
>>
>>> Thanks ,
>>> Henry
>>> =20
>> ----------------------------------------------------------------------
>>> ---
>>> Using Tomcat but need to do more? Need to support web services,
>>> security?
>>> Get stuff done quickly with pre-integrated technology to make your
>>> job easier
>>> Download IBM WebSphere Application Server v.1.0.1 based on Apache
>>> Geronimo
>>> http://sel.as-us.falkag.net/sel?
>>> =20
>> cmd=3Dlnk&kid=3D120709&bid=3D263057&dat=3D121642______________________=
________
>>> _________________
>>> infomap-nlp-users mailing list
>>> inf...@li...
>>> https://lists.sourceforge.net/lists/listinfo/infomap-nlp-users
>>>
>> <configure_output.txt>
>> <configure_gdbm.txt>
>> ----------------------------------------------------------------------=
=20
>> ---
>> Using Tomcat but need to do more? Need to support web services, =20
>> security?
>> Get stuff done quickly with pre-integrated technology to make your =20
>> job easier
>> Download IBM WebSphere Application Server v.1.0.1 based on Apache =20
>> Geronimo
>> http://sel.as-us.falkag.net/sel?=20
>> cmd=3Dlnk&kid=3D120709&bid=3D263057&dat=3D121642______________________=
________=20
>> _________________
>> infomap-nlp-users mailing list
>> inf...@li...
>> https://lists.sourceforge.net/lists/listinfo/infomap-nlp-users
>>
>=20
> -------------- next part --------------
> An HTML attachment was scrubbed...
> URL: http://sourceforge.net/mailarchive/forum.php?forum=3Dinfomap-nlp-u=
sers/attachments/20060817/4a05ca05/attachment.html=20
>=20
> ------------------------------
>=20
> -----------------------------------------------------------------------=
--
> Using Tomcat but need to do more? Need to support web services, securit=
y?
> Get stuff done quickly with pre-integrated technology to make your job =
easier
> Download IBM WebSphere Application Server v.1.0.1 based on Apache Geron=
imo
> http://sel.as-us.falkag.net/sel?cmd=3Dlnk&kid=3D120709&bid=3D263057&dat=
=3D121642
>=20
> ------------------------------
>=20
> _______________________________________________
> infomap-nlp-users mailing list
> inf...@li...
> https://lists.sourceforge.net/lists/listinfo/infomap-nlp-users
>=20
>=20
> End of infomap-nlp-users Digest, Vol 3, Issue 2
> ***********************************************
>=20
>=20

--=20
Tonio Wandmacher
Wiss. Mitarbeiter
Institut f=FCr Kognitionswissenschaft
FB K=FCnstliche Intelligenz
Universit=E4t Osnabr=FCck
Albrechtstra=DFe 28
D-49076 Osnabr=FCck

Raum 31/450c
Tel +49 (0)541 969-3391
E-Mail: ton...@un...