Re: [Inchworm-users] compilation problem

[Fabrice L. <fab...@ir...>]

  Hi Brian,

It worked perfectly. Thanks !

Fabrice

Le 18/02/2011 15:21, Brian J Haas a écrit :
> Hi Fabrice,
>
> Thanks for the info.  I hadn't experienced that error on our centos linux
> nor mac osx.  I did update the code to rectify the error, and I took the
> Werror out of the compilation.
>
> Could you do me a big favor and see if the latest code under SVN builds
> properly? If so, I'll plan for a new release shortly.   You can pull the
> code like so:
>
> svn co https://inchworm.svn.sourceforge.net/svnroot/inchworm inchworm
>
> and hopefully, just do the configure / make / make install
>
> Thanks!
>
> -brian
>
>
> On Fri, Feb 18, 2011 at 4:38 AM, Fabrice Legeai<fab...@ir...>wrote:
>
>>   Hi,
>>
>> I've installed the 01-20-2010 version of inchwom
>> on a linux Redhat (2.6.18-194.11.4.el5 x86_64).
>> But while compiling I got the following error :
>>
>> g++ -DHAVE_CONFIG_H -I. -I.. -Wall -Werror
>> -Wno-deprecated -MT IRKE.o -MD -MP -MF
>> .deps/IRKE.Tpo -c -o IRKE.o IRKE.cpp
>> cc1plus: warnings being treated as errors
>> IRKE.cpp: In member function ‘void
>> IRKE::populate_Kmers_from_fasta(const
>> std::string&, bool)’:
>> IRKE.cpp:126: warning: converting to ‘unsigned
>> int’ from ‘double’
>> IRKE.cpp: In member function ‘void
>> IRKE::compute_sequence_assemblies(KmerCounter&,
>> float, unsigned int, unsigned int, bool,
>> std::string)’:
>> IRKE.cpp:492: warning: converting to ‘unsigned
>> int’ from ‘double’
>> make[2]: *** [IRKE.o] Error 1
>> make[2]: Leaving directory
>> `/partage/tmp/inchworm_01-20-2010/src'
>> make[1]: *** [all-recursive] Error 1
>> make[1]: Leaving directory
>> `/partage/tmp/inchworm_01-20-2010'
>> make: *** [all] Error 2
>>
>> I achieved to compile by removing the -Werror from
>> the configure.ac and src/Makefile.in, but I am not
>> sure that it is the good option. Would you please
>> check ?
>>
>> Best regards,
>>
>> Fabrice Legeai
>> AphidBase
>>
>>
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>
>