ImReP

Immune repertoire assembly from RNA-Seq data

Brought to you by: imandric1

Downloads: 0 This Week

Last Update: 2017-03-18

Get an email when there's a new version of ImReP

Linux

ImReP is a tool written in Python programming language (version 2.7) which is designed to assemble CDR3 region sequences from RNA- or TCR-(BCR-)-Seq reads (either single- or paired-end) and provide immune repertoire as a set of clonotypes with their counts.

Project Samples

ImReP overview

Project Activity

See All Activity >

Follow ImReP

Other Useful Business Software

Earn up to 16% annual interest with Nexo. Icon

Earn up to 16% annual interest with Nexo.

Let your crypto work for you

Put idle assets to work with competitive interest rates, borrow without selling, and trade with precision. All in one platform. Geographic restrictions, eligibility, and terms apply.

Get started with Nexo.

Rate This Project

Login To Rate This Project

User Reviews

Be the first to post a review of ImReP!

Additional Project Details

Operating Systems

Registered

2016-11-18

Report inappropriate content

Try Google Cloud Risk-Free With $300 in Credit

No hidden charges. No surprise bills. Cancel anytime.

Use your credit across every product. Compute, storage, AI, analytics. When it runs out, 20+ products stay free. You only pay when you choose to.

Start Free

Recommended Projects

RSeQC
RNA-seq data QC
kallisto
Near-optimal RNA-Seq quantification
EricScript
Ericscript is a computational framework to detect gene fusions from paired end RNA-seq data with high sensitity and specificity.
FusionCatcher
Somatic fusion-genes finder for RNA-seq data
APAtrap
Identification of APA sites from RNA-seq data