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IJ-Tools is a collection of plugins and tools for the ImageJ software. It contains modules for image filtering (directional filtering), segmentation, analysis (perimeter estimation, geodesic diameter...), or visualisation (image overlay).

Links to some features of IJ-Tools:

• Fast Morphological Filters
• Geodesic Distance Map and Diameters
• Perimeter estimation

Computation of morphological gradient on blobs image

Propagation of geodesic distance for computing geodesic diameter of a fibre

Extension of an image by replicating border pixels

Example of dialog for the Fast_Morphology Plugin

Propagation of geodesic distance from marker in binary image

Computation of chamfer distance map from binarised leaf image

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Project Admins:

• David Legland