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Alejandro Blenkmann

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Last stable version:

May 2023 v1.020
- GridFit algorithm for localizing electrodes´ CT artifacts
- CEPA for projecting grids to the Smooth Cortical Envelope (SCE)
- Minor bugs corrected


Previous updates

16 Feb 2018 v1.010
- FreeSurfer parcelation visualized in colors on top of the 2D MRI and CT images
- Edge detection visualization for the CT in 2D views
- FreeSurfer color labels added to the 3D brain surface view (using annotation files)
- Color configuration file added
- Import coordinates from FieldTrip and EEGLAB feature added
- Minor bugs corrected

11 Oct 2017 v1.004
- Now using SPM12 functions to load images
- Images are resliced inside iElectrodes now
- Projection to smothed cortical envelope (SCE) using closest point or Dykstra springs method available
- Render electrodes 3D is faster
- Check for electrodes structure and project structure functions added
- Delete coordinate button added
- Configuration file added default_ielectrodes_options.m
- reorderElectrodes bug fixed
- Minor bugs corrected

13 Apr 2017 v1.003
- New button to manually change indexing
- Undo button for clustering. Makes easier to go back and redo last clustering (stored in memory).
- Updated clustering algorithm
- Edit box to change of electrode label individually
- Cross handle compatibility for old matlab versions.
- Counter of the actual number of clusters
- Click on 3D views changes coordinates in 2D views
- Automatically center FreeSurfer images when imported
- SCE surfaces are plotted independetly of pial surfaces
- Bug in projection to SCE corrected
- Bug in planning coordinates corrected
- Crosshair in 3D Threshold view added
- New version numbering and online check when start toolbox.

02/03 Feb 2017
- Projection of grid electrodes to SCE (convex hull) sourface
- Automatic check for new updates
- Load ch labels from EEGLAB .set files
- Load ch label from .edf (EEG) files
- Save electrode coordinates in EEGLAB or Fieldtrip format
- Small bugs corrected for compatiblility with MATLAB 2013a
- 2 new tutorial datasets are provided. One dataset is in native space and the other one in normalized space. Go to the Files menu, navigate to example_datasets folder and download the latest version.

24 Oct 2016
- Indexing step added (Now is 1st numbering and then labelling )
- lines between electrodes added in 3D view
- HO atlas working on non- 1mm isotropic images
- find corners method improved for deformed grids. This is part of the nubering method.
- Linked point of view for both of the 3D views
- projection to mesh method added (Dykstra method). Not included in the GUI yet.
- Meshresample executable for different platforms added. Mac bug corrected.

29 April 2016
- We recomend to use Matlab 2016a to avoid some graphics errors.
- Now iElectrodes can handle Nifti images with non orthogonal rotations.

21 Sept 2015
- Some bugs corrected affecting matlab version < 2014b
- Help button added. Automatically opens this wiki

17 Sept 2015
-Estereotactic frame calculations and make planning report.
-Extras folder including a script and a template image for [Planning coordinates and implantation surgery]


Related

Wiki: Cite Us - References
Wiki: Cite Us
Wiki: Home
Wiki: Planning coordinates and implantation surgery

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