I work with a stroke population, so every subject has a unique lesion location which I would like to mask out of the analysis. I do have subject-specific binary lesionmaps. So, is there a possibility to use these subject-specific lesions maps as subject-specific masks into the GIFT setup ICA step?
thank you for your help,
greetings,
Nele
If you would like to refer to this comment somewhere else in this project, copy and paste the following link:
I work with a stroke population, so every subject has a unique lesion location which I would like to mask out of the analysis. I do have subject-specific binary lesionmaps. So, is there a possibility to use these subject-specific lesions maps as subject-specific masks into the GIFT setup ICA step?
CAUTION: This email was sent from someone outside of the university. Do not click links or open attachments unless you recognize the sender and know the content is safe.
dear GIFT users,
I work with a stroke population, so every subject has a unique lesion location which I would like to mask out of the analysis. I do have subject-specific binary lesionmaps. So, is there a possibility to use these subject-specific lesions maps as subject-specific masks into the GIFT setup ICA step?
thank you for your help,
greetings,
Nele
Hi Nele,
Group ICA requires voxel dimension to be the same across subjects. You can average the binary masks (with some threshold) and input them into GIFT.
Thanks,
Srinivas
From: Nele De Bruyn neledebruyn@users.sourceforge.net
Sent: Thursday, September 2, 2021 7:53 AM
To: [icatb:discussion] 309910@discussion.icatb.p.re.sourceforge.net
Subject: [icatb:discussion] Gift mask in stroke population
dear GIFT users,
I work with a stroke population, so every subject has a unique lesion location which I would like to mask out of the analysis. I do have subject-specific binary lesionmaps. So, is there a possibility to use these subject-specific lesions maps as subject-specific masks into the GIFT setup ICA step?
thank you for your help,
greetings,
Nele
Gift mask in stroke populationhttps://nam11.safelinks.protection.outlook.com/?url=https%3A%2F%2Fsourceforge.net%2Fp%2Ficatb%2Fdiscussion%2F309910%2Fthread%2Fcef210e67e%2F%3Flimit%3D25%230983&data=04%7C01%7Csrachakonda%40gsu.edu%7C76b8bfae6d5841b7797508d96e191d5c%7C515ad73d8d5e4169895c9789dc742a70%7C0%7C0%7C637661877189646062%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000&sdata=nomvXWvbIkjq49fg%2BT6R2wF7nl8il2QD5v1ynX249tg%3D&reserved=0
Sent from sourceforge.net because you indicated interest in https://sourceforge.net/p/icatb/discussion/309910/https://nam11.safelinks.protection.outlook.com/?url=https%3A%2F%2Fsourceforge.net%2Fp%2Ficatb%2Fdiscussion%2F309910%2F&data=04%7C01%7Csrachakonda%40gsu.edu%7C76b8bfae6d5841b7797508d96e191d5c%7C515ad73d8d5e4169895c9789dc742a70%7C0%7C0%7C637661877189646062%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000&sdata=1%2Bhd7AZcYZ4b0kx6zuUcegkw3xTO9Q%2BlxVIIH4igbvo%3D&reserved=0
To unsubscribe from further messages, please visit https://sourceforge.net/auth/subscriptions/https://nam11.safelinks.protection.outlook.com/?url=https%3A%2F%2Fsourceforge.net%2Fauth%2Fsubscriptions%2F&data=04%7C01%7Csrachakonda%40gsu.edu%7C76b8bfae6d5841b7797508d96e191d5c%7C515ad73d8d5e4169895c9789dc742a70%7C0%7C0%7C637661877189656017%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000&sdata=wXZ5l7JJpBSEKHlQk07IFfZYZ4LbJhYoTIj%2Bekm0dOY%3D&reserved=0
CAUTION: This email was sent from someone outside of the university. Do not click links or open attachments unless you recognize the sender and know the content is safe.