Dear experts:
I want to use Yeo's Cortical Parcellation, and I download the templates from https://www.freesurfer.net/fswiki/CorticalParcellation_Yeo2011 , but I'm confused about how to change it to a format which can be used by 'component labeller'. Can you teach me how can I done this? I will be so grateful to receive your reply, thank you!
Best regards!
QingYuan
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Template should be converted to a nifti file and labels (nifti file numbers) should be specified for each label. Example label file is located in icatb/icatb_templates/RSN.txt file.
Thanks,
Srinivas
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Dear experts:
Thank for your reply! I find that every network in the template should be separated in different 3D.nii file, and be named as 1,2,3... then putting them in one 4D nii file. Now the problem has been solved, thank you!
Best regards!
QingYuan
If you would like to refer to this comment somewhere else in this project, copy and paste the following link:
Hello, I have a question about the templates in icatb/icatb_templates/RSN.zip. I'd like to know the basics of the way to distinguish those networks(like a paper, maybe?), and which space is used? When I display it in an MNI space, I find there are some parts out of the brain. Is it defined in a Talairach space?
Looking forward to your reply,thank you!
Best regards
If you would like to refer to this comment somewhere else in this project, copy and paste the following link:
Hello, I have a question about the templates in icatb/icatb_templates/RSN.zip. I'd like to know the basics of the way to distinguish those networks(like a paper, maybe?), and which space is used? When I display it in an MNI space, I find there are some parts out of the brain. Is it defined in a Talairach space?
Looking forward to your reply,thank you!
Best regards
CAUTION: This email was sent from someone outside of the university. Do not click links or open attachments unless you recognize the sender and know the content is safe.
Dear experts:
I want to use Yeo's Cortical Parcellation, and I download the templates from https://www.freesurfer.net/fswiki/CorticalParcellation_Yeo2011 , but I'm confused about how to change it to a format which can be used by 'component labeller'. Can you teach me how can I done this? I will be so grateful to receive your reply, thank you!
Best regards!
QingYuan
Hi QingYuan,
Template should be converted to a nifti file and labels (nifti file numbers) should be specified for each label. Example label file is located in icatb/icatb_templates/RSN.txt file.
Thanks,
Srinivas
Dear experts:
Thank for your reply! I find that every network in the template should be separated in different 3D.nii file, and be named as 1,2,3... then putting them in one 4D nii file. Now the problem has been solved, thank you!
Best regards!
QingYuan
Dear experts:
Hello, I have a question about the templates in icatb/icatb_templates/RSN.zip. I'd like to know the basics of the way to distinguish those networks(like a paper, maybe?), and which space is used? When I display it in an MNI space, I find there are some parts out of the brain. Is it defined in a Talairach space?
Looking forward to your reply,thank you!
Best regards
Hi QingYuan,
Its in MNI space. Please see more info @ https://academic.oup.com/cercor/article/22/1/158/366732
Thanks,
Srinivas
From: QingYuan alannormal@users.sourceforge.net
Sent: Wednesday, November 3, 2021 1:34 AM
To: [icatb:discussion] 309910@discussion.icatb.p.re.sourceforge.net
Subject: [icatb:discussion] create new templates
Dear experts:
Hello, I have a question about the templates in icatb/icatb_templates/RSN.zip. I'd like to know the basics of the way to distinguish those networks(like a paper, maybe?), and which space is used? When I display it in an MNI space, I find there are some parts out of the brain. Is it defined in a Talairach space?
Looking forward to your reply,thank you!
Best regards
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