mthm posted a comment on discussion General Discussion

I ran java ‐jar C:\MyTemp\HelitronScanner_V1.0\HelitronScanner\HelitronScanner.jar scanHead -lcv_filepath C:\MyTemp\HelitronScanner_V1.0\TrainingSet\training.set.head90.N.fa -g monCan3F9.fa -buffer_size 0 --rc ‐threshold 95 -o head the head.txt output consists only the TE headers: monCan3F9.00001 monCan3F9.00002 monCan3F9.00003 monCan3F9.00004 monCan3F9.00005 monCan3F9.00006 monCan3F9.00007 monCan3F9.00008 monCan3F9.00009 monCan3F9.00010 . . . the output in the terminal looks like this: scanHead...

Felipe Marques de Almeida created ticket #1

LCV doubt

Agnieszka Golicz posted a comment on discussion General Discussion

Hello, I have been using HScanner lately and it seemed to be working very well but...

Wenwei modified a wiki page

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