Some users have reported troubles with genewise crashing in the coures of a HaMStR analysis, and yesterday I encountered this problem for the first time too. Unfortunately, I cannot provide a really satisfying solution, but for a modification of the perlmodul run_genewise_hamstr.pm in the lib directory removed the problem:
Genewise crashing
Some users have reported troubles with genewise crashing in the coures of a HaMStR analysis, and yesterday I encountered this problem for the first time too. Unfortunately, I cannot provide a really satisfying solution, but for a modification of the perlmodul run_genewise_hamstr.pm in the lib directory removed the problem:
Replace:
$self_tmp = [
genewise -trans -cdna -pep -sum $path/$protname $path/$dnaname];with
$self_tmp = [
genewise -trans -cdna -sum $path/$protname $path/$dnaname];No further adaptations are necessary.