Hackathon for Outbreak Analysis in R Activity
A hackathon for the analysis of disease outbreaks in R
Status: Planning
Brought to you by:
jombart
Activity for Hackathon for Outbreak Analysis in R
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Thibaut Jombart modified ticket #101
show_guide is now depricated
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Thanks for the report. This project has migrated to github: https://github.com/thibautjombart/OutbreakTools...
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Anonymous created ticket #101
show_guide is now depricated
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Thibaut Jombart committed [b2c942]
New version post release; addressed stuff in DE...
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Thibaut Jombart committed [371f46]
RC 0.1-12
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Caitlin Collins committed [4aba20]
updated changeLog
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added .importFromJSON FUNCTION which (uses JSON...
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resolved merge conflict in utils fn .restoreNum...
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summary fns changed to deal with NAs better
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Yee Loong committed [24dbcd]
Minor changes to examples. Added comments.
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corrected for 'ngrp' search algorithm
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Corrected gengraph for searching with 'ngrp'
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Thibaut Jombart committed [dde29e]
fixed bug in from/to
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Added option for comments=T, mst=T.
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Added option for comments=TRUE. Included email.
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Thibaut Jombart committed [3c66b1]
Forgot these ones.
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Thibaut Jombart committed [4a3e12]
replayed the changes made by Caitlin on newfeat...
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Thibaut Jombart committed [d3a8d4]
commented out Caitlin's version of plot for obk...
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Thibaut Jombart committed [b16358]
manual merge - that file don't matter anyway
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Option added to use minimum.spanning.tree
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Option to use the minimum.spanning.tree
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Added data.cutoff and changed to hclust method.
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Added data.cutoff and changed to hclust method.
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Added option 'search.ngrp' & minor adjustments
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Changes to options and examples; corrected errors
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Changes made to options & warning msg included
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Edit help-file to include new changes
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warning message added for nclust != ngrp
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added nbreaks into options
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edits made to outputAll=T option
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commit help-file for combgraphs.R
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initial commit of combgraphs.R to yee branch
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added method for generating color schemes in co...
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Anton Camacho committed [25831c]
Change tree in FluH1N1pdm2009.RData
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Anonymous created ticket #100
add separator to sorted timeline plot
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Now importing selectively stuff for networkDyna...
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Renaming epibase into OutbreakTools
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renamed files for new pkg name
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