Re: [GUSDEV] PluginError issue

[Mark S. H. <mh...@ug...>]

See "HOW TO INSTALL IT" in the README that comes in the Error tar  
file (that's the actual letter case used; I'm not shouting at you).

Did you download the tar file or just the Error.pm file? Get the tar  
file.

By default it installs into your system-wide Perl library (so you'll  
likely need root privileges). Technically you could install it in  
your gus_home, but don't do that.

GUS' PluginError.pm uses Error.pm. One is not a replacement for the  
other.

Good luck,
-Mark

On Oct 27, 2006, at 7:22 PM, mro...@cs... wrote:

> Mark,
>
> Thanks for you answer.
>
> I downloaded Error.pm version 0.17006, and I looked into every GUS  
> folder
> to see if there is another file called Error.pm to replace it, but  
> could
> not find any.
>
> The file called PluginError.pm which seems to be the one with  
> errors is
> located at:
> /home/acrl-storage-1/gusdb-dev/GUS/gus_home/lib/perl/GUS/PluginMgr
>
> Do I need to replace PluginError.pm with Error.pm version 0.17006,  
> rename
> it Error.pm to PluginError.pm, or added in the same directory?
>
> Thanks again
>
> Michael
>
>
>> I'm coming in late to this thread but it looks like you need to
>> install the Error module from CPAN.
>>
>> http://search.cpan.org/~shlomif/Error-0.17008/lib/Error.pm
>>
>> I had to install version 0.17006, the latest 0.17008 version didn't
>> compile for me out of the box.
>>
>> -M
>> On Oct 27, 2006, at 8:21 AM, mro...@cs... wrote:
>>
>>> Steve,
>>>
>>> I am sorry to be a pain, but I was wondering if you have received
>>> any news
>>> from John concerning the PluginError.pm
>>>
>>> Thank you
>>>
>>>
>>> Michael
>>>
>>>
>>>
>>>> john-
>>>>
>>>> this GUS user, michael, has downloaded and installed the latest  
>>>> GUS.
>>>>
>>>> your new PluginError.pm is giving him problems.  see below.
>>>>
>>>> steve
>>>>
>>>> mro...@cs... wrote:
>>>>
>>>>> Steve,
>>>>>
>>>>> Thanks for the phone orientation offer, tomorrow will be great, I
>>>>> am on
>>>>> my
>>>>> way to a 3 hour class.
>>>>>
>>>>> In the meantime I run:
>>>>>
>>>>>  mrobi002@acrl-linux-1:/home/acrl-storage-1/gusdb-dev/GUS/
>>>>>  gus_home/lib/perl/GUS/Supported/Plugin 9%
>>>>>  ga GUS::Supported::Plugin::InsertSequenceFeatures
>>>>>  --mapFile $HOME/"pseudomonas aeruginosa"/pa01/genbank2gus.xml
>>>>>  --inputFileOrDir $HOME/"pseudomonas aeruginosa"/pa01/ 
>>>>> NC_002516.gbk
>>>>>  --fileFormat genbank
>>>>>  --extDbName "Pseudomonas_aeruginosa"
>>>>>  --extDbRlsVer  "1000"
>>>>>  --soCvsVersion "1.1.4"
>>>>>  --commit
>>>>>
>>>>>
>>>>> and got:
>>>>>
>>>>>  Base class package "Error" is empty.
>>>>>    (Perhaps you need to 'use' the module which defines that  
>>>>> package
> %
>