Re: [GUSDEV] Question Regarding: InsertSequenceFeatures

[Fernan A. <fe...@ii...>]

+----[ Kumar, Sanjeev <San...@ng...> (16.May.2006 17:51):
|
| Hi Group,
|    I am having a problem in trapping the errors generated by
| InsertSequenceFeatures in a file.
|    When I am using " ga GUS::....> errorfile", it captures all other
| outputs except Error string / error   
|    description. So, it is not helpful.
|    Also, I tried to use parameter "--failDir", it didn't do any thing.
|    I am sure there must be a way, pl. guide me in finding.
|
+----]

Kumar, 

by doing 'ga ... > file' you're only redirecting stdout. 

If you want to redirect stderr you should do something like
'ga ... >& file.err'

If you want to redirect both, it will depend on the shell
you're using. For csh the following works for me:
( ga ... > file.stdout ) >& file.stderr

For bash, I'm sure Google will tell you :)

The other alternative is to use script(1) first and then run
all your commands within a script session.  When you exit
script (ctrl-d or just 'exit') everything (including all
output printed to stdout and stderr) will be in the file you
specified or in a file named 'typescript' in the current
directory.

Hope this helps,

fernan