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From: Thomas K. <ka...@ip...> - 2006-02-20 18:35:53
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Hi all,
I cannot install GUS here. First, the schema installation says (complete
output at the end):
[InstallSchema] 19:20:52,417 ERROR InstallSchemaTask:113 - Null version,
skipping. Note: You will need to manually add a version number to the DB
The installation continues, but aborts soon after with
[javac]
/home/kappler/rest/software/GUS_svn/GUS/project_home/GUS/Model/src/java/org/gusdb/model/Core/Algorithm_Row.java:86:
cannot find symbol
[javac] symbol : class notdefyet
[javac] location: class org.gusdb.model.Core.Algorithm_Row
[javac] public void setModificationDate (notdefyet value)
The DB looks reasonable. core.tableinfo is present and
select modification_date from core.tableinfo;
shows 962 rows contaiing a date from installation time.
What "version number" am I supposed to add to the DB?
I tried both with GUS 3.5.0 and an SVN checkout from today.
Other software used: postgres 8.1.3, java 1.5.0_05, ant 1.6.2.
Regards,
Thomas Kappler
---------
The complete output (only the first two of the javac errors) is:
[echo] proj=GUS
[echo] .
[echo] Installing CBIL/Bio
[echo] .
[echo] Installing CBIL/CSP
[echo] .
[echo] Installing CBIL/Util
[echo] .
[echo] Installing CBIL/Cider
[echo] .
[echo] Installing CBIL/HQ
[echo] .
[echo] Installing CBIL/ObjectMapper
[concat] No existing files and no nested text, doing nothing
[echo] .
[echo] Installing GUS/Supported
[echo] .
[echo] Installing GUS/Community
[echo] .
[echo] Installing GUS/DBAdmin
[echo] .
[echo] Installing GUS/GOPredict
[echo] .
[echo] Installing GusSchema/Definition
[echo] .
[echo] Installing GUS/DBAdmin
[InstallSchema] 19:16:59,480 INFO InstallSchemaTask:73 - Reading
database from
/home/kappler/rest/software/GUS_svn/GUS/project_home/GusSchema/Definition/config/gus_schema.xml
[InstallSchema] 19:16:59,578 INFO SchemaReader:48 - Reading Database
[InstallSchema] 19:17:04,504 INFO Database:161 - Resolving Database
References
[InstallSchema] 19:17:05,467 INFO DatabaseValidator:57 - Validating
Database: 'null'
[InstallSchema] 19:17:06,083 INFO DatabaseValidator:57 - Validating
Database: 'null'
[InstallSchema] 19:17:06,130 INFO SchemaWriter:33 - Writing Database
[InstallSchema] 19:17:06,912 INFO DatabaseValidator:57 - Validating
Database: 'null'
[InstallSchema] 19:17:06,958 INFO SchemaWriter:33 - Writing Database
[InstallSchema] 19:20:19,371 ERROR InstallSchemaTask:113 - Null version,
skipping. Note: You will need to manually add a version number to the DB
[InstallSchema] 19:20:52,417 ERROR InstallSchemaTask:113 - Null version,
skipping. Note: You will need to manually add a version number to the DB
[concat] No existing files and no nested text, doing nothing
[echo] .
[echo] Installing GUS/ObjRelP
[echo] .
[echo] Installing GUS/ObjRelJ
[copy] Copying 2 files to
/home/kappler/rest/software/GUS_svn/GUS/project_home/GUS/Model/src/java/org/gusdb/model/DoTS
[copy] Copying 1 file to
/home/kappler/rest/software/GUS_svn/GUS/project_home/GUS/Model/src/java/org/gusdb/model/SRes
[echo] Starting target: JavaModel
[echo] .
[echo] Installing GUS/Model
[javac] Compiling 1281 source files to
/home/kappler/rest/software/GUS_svn/GUS/project_home/GUS/Model/classlog
[javac]
/home/kappler/rest/software/GUS_svn/GUS/project_home/GUS/Model/src/java/org/gusdb/model/Core/Algorithm_Row.java:86:
cannot find symbol
[javac] symbol : class notdefyet
[javac] location: class org.gusdb.model.Core.Algorithm_Row
[javac] public void setModificationDate (notdefyet value)
[javac] ^
[javac]
/home/kappler/rest/software/GUS_svn/GUS/project_home/GUS/Model/src/java/org/gusdb/model/Core/Algorithm_Row.java:91:
cannot find symbol
[javac] symbol : class notdefyet
[javac] location: class org.gusdb.model.Core.Algorithm_Row
[javac] public notdefyet getModificationDate () { return
(notdefyet)get_Attribute("modification_date"); }
[...]
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