[GUSDEV] Re: ISF errors list

[Aaron J. M. <am...@pc...>]

On Feb 17, 2006, at 6:58 PM, davila wrote:

> 4. 64524.txt
> The file 64524.gb is another example


The error is:

Feature 'CDS' has more than one value for tag 'EC_number'
The values are:
         1.2.3.4
         1.6.5.5


The ISF plugin works with a mapping file that either specifies one-to- 
one mappings between feature tags and table columns, or a special  
case handler that will be invoked.  In this case, you have more than  
one EC number, and thus you cannot use a one-to-one mapping (which  
column does your mapping file specify should be used for the EC number?)

GUS does have support for multiple EC#'s per sequence, but you'll  
have to author a special case handler to make use of these tables.

-Aaron

--
Aaron J. Mackey, Ph.D.
Project Manager, ApiDB Bioinformatics Resource Center
Penn Genomics Institute, University of Pennsylvania
email:  am...@pc...
office: 215-898-1205 (Biology, 212 Goddard Labs)
         215-746-7018 (PCBI, 1428 Blockley Hall)
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