[GUSDEV] PsiPred view

[Chris S. <sto...@pc...>]

Dear Jian,

Awhile back you had requested the addition of two CLOB attributes to  
AAFeatureImp in order to capture ouput from Psipred. I had approved  
that request but learnt from Mike that with the way we are managing  
schema changes to GUS now "the schema representation abstracts the  
imp tables away, so the clobs would be added automatically when used  
by a subclass.  Until there's a subclass that's going to have a clob  
column, I can't force them into the imp table."

This simply means that we need to submit a specific view such as for  
Psipred that has clobs as needed. Can you supply that view (or if you  
prefer a more general view) of AAFeatureImp?

Shailesh, where and how are we storing Psipred output you generated  
for PlasmoDB in GUS?

Thanks,
Chris

Chris Stoeckert, Ph.D.
Research Associate Professor, Dept. of Genetics
1415 Blockley Hall, Center for Bioinformatics
423 Guardian Dr., University of Pennsylvania
Philadelphia, PA 19104
Ph: 215-573-4409 FAX: 215-573-3111