Re: [GUSDEV] Which plugin is for EMBL file loading?

[Steve F. <sfi...@pc...>]

right now it is NASequence specific.

but... i don't think it would take much to upgrade it to handle 
AASequence. 

volunteers?  (i can't do it any time soon)

also, the main thing about this plugin is that the mapping from input 
features to gus features is 100% configurable.

steve

Angel Pizarro wrote:

> A little more detail, We are trying to load IPI protein data, which is 
> in UniProt format, which looks like EMBL format. Will this plugin 
> instert AAsequence and features?
>
> Thanks,
> Angel
>
> Steve Fischer wrote:
>
>> GUS::Supported::Plugin::InsertSequenceFeatures
>>
>> use:
>>  % ga GUS::Supported::Plugin::InsertSequenceFeatures --help
>>
>> to find out more about it.
>>
>> steve
>>
>> Weichen Wu wrote:
>>
>>> Hi,
>>>
>>> Is there a plugin to load sequence files in EMBL format?
>>>
>>> Thanks,
>>> Weichen
>>>
>>>
>>> -------------------------------------------------------
>>> This SF.Net email is sponsored by:
>>> Power Architecture Resource Center: Free content, downloads, 
>>> discussions,
>>> and more. http://solutions.newsforge.com/ibmarch.tmpl
>>> _______________________________________________
>>> Gusdev-gusdev mailing list
>>> Gus...@li...
>>> https://lists.sourceforge.net/lists/listinfo/gusdev-gusdev
>>
>>
>>
>>
>>
>> -------------------------------------------------------
>> This SF.Net email is sponsored by:
>> Power Architecture Resource Center: Free content, downloads, 
>> discussions,
>> and more. http://solutions.newsforge.com/ibmarch.tmpl
>> _______________________________________________
>> Gusdev-gusdev mailing list
>> Gus...@li...
>> https://lists.sourceforge.net/lists/listinfo/gusdev-gusdev
>
>
>
>