Re: [GUSDEV] InsertSequenceFeatures

[Steve F. <sfi...@pc...>]

Adhemar-

You need to update all of $PROJECT_HOME/GUS/Supported, not just that one 
file.

steve

Adhemar Zerlotini Neto wrote:

> Hello
>
> I just downloaded the InsertSequenceFeatures plugin revision 3451 and 
> when I try to run it the following error appears:
>
> ERROR:
> Can't locate object method "ignoreFeature" via package 
> "GUS::Supported::BioperlFeatMapper" at 
> /usr/local/SchistoDB/gus_home/lib/perl/GUS/Supported/Plugin/InsertSequenceFeatures.pm 
> line 753, <GEN39> line 42.
>
> STACK TRACE:
>  at 
> /usr/local/SchistoDB/gus_home/lib/perl/GUS/Supported/Plugin/InsertSequenceFeatures.pm 
> line 753
>         
> GUS::Supported::Plugin::InsertSequenceFeatures::makeImmediateFeature('GUS::Supported::Plugin::InsertSequenceFeatures=HASH(0x850b8cc)', 
> 'Bio::SeqFeature::Generic=HASH(0x9731c10)', 4) called at 
> /usr/local/SchistoDB/gus_home/lib/perl/GUS/Supported/Plugin/InsertSequenceFeatures.pm 
> line 728
>         
> GUS::Supported::Plugin::InsertSequenceFeatures::makeFeature('GUS::Supported::Plugin::InsertSequenceFeatures=HASH(0x850b8cc)', 
> 'Bio::SeqFeature::Generic=HASH(0x9731c10)', 4) called at 
> /usr/local/SchistoDB/gus_home/lib/perl/GUS/Supported/Plugin/InsertSequenceFeatures.pm 
> line 368
>         
> GUS::Supported::Plugin::InsertSequenceFeatures::run('GUS::Supported::Plugin::InsertSequenceFeatures=HASH(0x850b8cc)', 
> 'HASH(0x94c2c94)') called at 
> /usr/local/SchistoDB/gus_home/lib/perl/GUS/PluginMgr/GusApplication.pm 
> line 469
>         eval {...} called at 
> /usr/local/SchistoDB/gus_home/lib/perl/GUS/PluginMgr/GusApplication.pm 
> line 461
>         
> GUS::PluginMgr::GusApplication::doMajorMode_RunOrReport('GUS::PluginMgr::GusApplication=HASH(0x84d5c20)', 
> 'GUS::Supported::Plugin::InsertSequenceFeatures', 1) called at 
> /usr/local/SchistoDB/gus_home/lib/perl/GUS/PluginMgr/GusApplication.pm 
> line 380
>         
> GUS::PluginMgr::GusApplication::doMajorMode_Run('GUS::PluginMgr::GusApplication=HASH(0x84d5c20)', 
> 'GUS::Supported::Plugin::InsertSequenceFeatures') called at 
> /usr/local/SchistoDB/gus_home/lib/perl/GUS/PluginMgr/GusApplication.pm 
> line 288
>         
> GUS::PluginMgr::GusApplication::doMajorMode('GUS::PluginMgr::GusApplication=HASH(0x84d5c20)', 
> 'GUS::Supported::Plugin::InsertSequenceFeatures') called at 
> /usr/local/SchistoDB/gus_home/lib/perl/GUS/PluginMgr/GusApplication.pm 
> line 197
>         
> GUS::PluginMgr::GusApplication::parseAndRun('GUS::PluginMgr::GusApplication=HASH(0x84d5c20)', 
> 'ARRAY(0x84e9918)') called at /usr/local/SchistoDB/gus_home/bin/ga line 11
>
>
> Do anybody know what is it about?
>
> Thanks
>
> Adhemar ------------------------------------------------------- SF.Net 
> email is sponsored by: Tame your development challenges with Apache's 
> Geronimo App Server. Download it for free - -and be entered to win a 
> 42" plasma tv or your very own Sony(tm)PSP. Click here to play: 
> http://sourceforge.net/geronimo.php 
> _______________________________________________ Gusdev-gusdev mailing 
> list Gus...@li... 
> https://lists.sourceforge.net/lists/listinfo/gusdev-gusdev