From: Steve F. <sfi...@pc...> - 2005-09-04 16:39:39
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folks- The NASequence table has two columns dealing with the type of the sequence, one a link to Dots.SequenceType, the other a link to SRes.SequenceOntology. The new InsertSequenceFeatures plugin allows you so specify either or both of these. The plugin requires you to have already loaded the SO, even if you don't use it for the sequence type, because it is needed for the features. however, if you want to use SequenceType, you will have needed to populate the SequenceType table. There is no standard or agreed upon vocabulary to use. Nor is there a plugin to load this CV. I am wondering: why do we need SequenceType when we now have the SO? Perhaps it is time to abandon SequenceType. steve |