Re: [GUSDEV] Build

[Adhemar Z. N. <ad...@cp...>]

Hi Michael,<br /><br />Thanks for the tip. I'm a newbie on oracle also.
Now I created the tablespace. The build ran perfectly.<br /><br
/>Regards,<br /><br />Adhemar<br /><br />&gt; <br />&gt; Hi Adhemar,<br
/>&gt; <br />&gt; Can you confirm that the GUSDB tablespace does exist?=20
Perhaps by logging<br />&gt; into your instance as the GUS user and
doing:<br />&gt; <br />&gt; create table test ( test_id number) tablespac=
e
gusdb;<br />&gt; <br />&gt;&gt; [InstallSchema] INFO: Validating Database=
:
'null'<br />&gt; <br />&gt; This is normal-- don't worry about that
&quot;null&quot; in there.<br />&gt; <br />&gt; Thanks,<br />&gt; <br
/>&gt; --Mike<br />&gt; <br />&gt; <br />&gt; On 8/23/05 4:16 PM,
&quot;Adhemar Zerlotini Neto&quot; <adhemar @cpqrr.fiocruz.br=3D""><br
/>&gt; wrote:<br />&gt; <br />&gt;&gt;<br />&gt;&gt; Hi Everybody,<br
/>&gt;&gt;<br />&gt;&gt; I=B4m a newbie using GUS. I=B4m trying to instal=
l the
3.5 version on Oracle<br />&gt;&gt; 10g<br />&gt;&gt; and I=B4m having so=
me
problems with the build script.<br />&gt;&gt;<br />&gt;&gt; I tried to us=
e
the build script serveral times from the scratch. Here is<br />&gt;&gt;
the<br />&gt;&gt; output of the last try:<br />&gt;&gt;<br />&gt;&gt;
[oracle@gus install]$<br />&gt;&gt; build GUS install -append
-installDBSchema<br />&gt;&gt;     [mkdir] Created dir:<br />&gt;&gt;
/usr/local/GUS/project_home/install/classes<br />&gt;&gt;     [javac]
Compiling 1<br />&gt;&gt; source file to
/usr/local/GUS/project_home/install/classes<br />&gt;&gt;
[WritePropertyFiles] Aug 23, 2005 9:37:09 AM<br />&gt;&gt;
org.gusdb.install.WritePropertyFileTask initialize<br />&gt;&gt;
[WritePropertyFiles] INFO: Creating configuration directory<br
/>&gt;&gt;<br />&gt;&gt; [copy] Copying 1 file to
/usr/local/GUS/gus_home/config<br />&gt;&gt;     [copy]<br />&gt;&gt;
Copying 1 file to /usr/local/GUS/gus_home/config<br />&gt;&gt;     [echo]
.<br />&gt;&gt;      [echo] Installing CBIL/Bio<br />&gt;&gt;     [mkdir]
Created dir:<br />&gt;&gt; /usr/local/GUS/gus_home/bin<br />&gt;&gt;    =20
[copy] Copying 5 files to<br />&gt;&gt; /usr/local/GUS/gus_home/bin<br
/>&gt;&gt;     [mkdir] Created dir:<br />&gt;&gt;
/usr/local/GUS/gus_home/lib/perl/CBIL/Bio<br />&gt;&gt;      [copy]
Copying 66<br />&gt;&gt; files to
/usr/local/GUS/gus_home/lib/perl/CBIL/Bio<br />&gt;&gt;     [mkdir]<br
/>&gt;&gt; Created dir: /usr/local/GUS/gus_home/test/CBIL/Bio<br
/>&gt;&gt;      [copy]<br />&gt;&gt; Copying 4 files to
/usr/local/GUS/gus_home/test/CBIL/Bio<br />&gt;&gt;    [mkdir]<br
/>&gt;&gt; Created dir: /usr/local/GUS/gus_home/data/CBIL/Bio<br
/>&gt;&gt;     [copy]<br />&gt;&gt; Copying 9 files to
/usr/local/GUS/gus_home/data/CBIL/Bio<br />&gt;&gt;  [echo]<br />&gt;&gt;
.<br />&gt;&gt;      [echo] Installing CBIL/CSP<br />&gt;&gt;      [copy]
Copying 1 file to<br />&gt;&gt; /usr/local/GUS/gus_home/bin<br />&gt;&gt;=
=20
   [mkdir] Created dir:<br />&gt;&gt;
/usr/local/GUS/gus_home/lib/perl/CBIL/CSP<br />&gt;&gt;     [copy] Copyin=
g
11<br />&gt;&gt; files to /usr/local/GUS/gus_home/lib/perl/CBIL/CSP<br
/>&gt;&gt;     [mkdir]<br />&gt;&gt; Created dir:
/usr/local/GUS/gus_home/lib/java<br />&gt;&gt;      [copy] Copying 2<br
/>&gt;&gt; files to /usr/local/GUS/gus_home/lib/java<br />&gt;&gt;   =20
[mkdir] Created dir:<br />&gt;&gt; /usr/local/GUS/gus_home/doc/CBIL/CSP<b=
r
/>&gt;&gt;      [copy] Copying 10 files to<br />&gt;&gt;
/usr/local/GUS/gus_home/doc/CBIL/CSP<br />&gt;&gt;     [mkdir] Created
dir:<br />&gt;&gt; /usr/local/GUS/project_home/CBIL/CSP/classes<br
/>&gt;&gt;    [javac] Compiling 27<br />&gt;&gt; source files to
/usr/local/GUS/project_home/CBIL/CSP/classes<br />&gt;&gt;<br />&gt;&gt;
[javac] Note:<br />&gt;&gt;
/usr/local/GUS/project_home/CBIL/CSP/src/java/edu/cbil/csp/dialog/Action.=
java<br
/>&gt;&gt; uses or overrides a deprecated API.<br />&gt;&gt;     [javac]
Note: Recompile with<br />&gt;&gt; -Xlint:deprecation for details.<br
/>&gt;&gt;     [javac] Note: Some input files<br />&gt;&gt; use unchecked
or unsafe operations.<br />&gt;&gt;     [javac] Note: Recompile with<br
/>&gt;&gt; -Xlint:unchecked for details.<br />&gt;&gt;       [jar]
Building jar:<br />&gt;&gt;
/usr/local/GUS/gus_home/lib/java/CBIL-CSP.jar<br />&gt;&gt;     [echo]
.<br />&gt;&gt;<br />&gt;&gt; [echo] Installing CBIL/Util<br />&gt;&gt;  =
=20
 [mkdir] Created dir:<br />&gt;&gt;
/usr/local/GUS/gus_home/lib/perl/CBIL/Util<br />&gt;&gt;     [copy]
Copying 8<br />&gt;&gt; files to
/usr/local/GUS/gus_home/lib/perl/CBIL/Util<br />&gt;&gt;     [mkdir]<br
/>&gt;&gt; Created dir: /usr/local/GUS/gus_home/doc/CBIL/Util<br
/>&gt;&gt;      [copy]<br />&gt;&gt; Copying 1 file to
/usr/local/GUS/gus_home/doc/CBIL/Util<br />&gt;&gt;      [echo]<br
/>&gt;&gt; .<br />&gt;&gt;      [echo] Installing CBIL/HQ<br />&gt;&gt;  =
=20
  [copy] Copying 1 file to<br />&gt;&gt; /usr/local/GUS/gus_home/bin<br
/>&gt;&gt;     [mkdir] Created dir:<br />&gt;&gt;
/usr/local/GUS/gus_home/lib/perl/CBIL/HQ<br />&gt;&gt;      [copy] Copyin=
g
3 files<br />&gt;&gt; to /usr/local/GUS/gus_home/lib/perl/CBIL/HQ<br
/>&gt;&gt;      [echo] .<br />&gt;&gt;<br />&gt;&gt; [echo] Installing
CBIL/ObjectMapper<br />&gt;&gt;     [mkdir] Created dir:<br />&gt;&gt;
/usr/local/GUS/gus_home/lib/perl/CBIL/ObjectMapper<br />&gt;&gt;=20
[copy]<br />&gt;&gt; Copying 7 files to
/usr/local/GUS/gus_home/lib/perl/CBIL/ObjectMapper<br />&gt;&gt;    =20
[copy] Copying 1 file to /usr/local/GUS/gus_home/config<br />&gt;&gt;<br
/>&gt;&gt; [mkdir] Created dir:
/usr/local/GUS/gus_home/doc/CBIL/ObjectMapper<br />&gt;&gt;     [copy]
Copying 1 file to<br />&gt;&gt;
/usr/local/GUS/gus_home/doc/CBIL/ObjectMapper<br />&gt;&gt;    [concat] N=
o
existing<br />&gt;&gt; files and no nested text, doing nothing<br
/>&gt;&gt;      [echo] .<br />&gt;&gt;<br />&gt;&gt; [echo] Installing
GUS/Supported<br />&gt;&gt;      [copy] Copying 1 file to<br />&gt;&gt;
/usr/local/GUS/gus_home/bin<br />&gt;&gt;     [mkdir] Created dir:<br
/>&gt;&gt; /usr/local/GUS/gus_home/lib/perl/GUS/Supported<br />&gt;&gt;  =
=20
  [copy] Copying 2<br />&gt;&gt; files to
/usr/local/GUS/gus_home/lib/perl/GUS/Supported<br />&gt;&gt;   =20
[mkdir]<br />&gt;&gt; Created dir:
/usr/local/GUS/gus_home/lib/perl/GUS/Supported/Plugin<br />&gt;&gt;    =20
[copy] Copying 19 files to<br />&gt;&gt;
/usr/local/GUS/gus_home/lib/perl/GUS/Supported/Plugin<br />&gt;&gt;   =20
[copy]<br />&gt;&gt; Copying 2 files to /usr/local/GUS/gus_home/config<br
/>&gt;&gt;    [mkdir] Created<br />&gt;&gt; dir:
/usr/local/GUS/gus_home/doc/GUS/Supported<br />&gt;&gt;   [copy] Copying
5<br />&gt;&gt; files to /usr/local/GUS/gus_home/doc/GUS/Supported<br
/>&gt;&gt;      [echo] .<br />&gt;&gt;     [echo] Installing
GUS/Community<br />&gt;&gt;      [copy] Copying 4 files to<br />&gt;&gt;
/usr/local/GUS/gus_home/bin<br />&gt;&gt;     [mkdir] Created dir:<br
/>&gt;&gt; /usr/local/GUS/gus_home/lib/perl/GUS/Community<br />&gt;&gt;  =
=20
  [copy] Copying 10<br />&gt;&gt; files to
/usr/local/GUS/gus_home/lib/perl/GUS/Community<br />&gt;&gt;     [copy]<b=
r
/>&gt;&gt; Copying 2 files to /usr/local/GUS/gus_home/lib/java<br
/>&gt;&gt;    [mkdir]<br />&gt;&gt; Created dir:
/usr/local/GUS/gus_home/lib/perl/GUS/Community/Plugin<br />&gt;&gt;    =20
[copy] Copying 41 files to<br />&gt;&gt;
/usr/local/GUS/gus_home/lib/perl/GUS/Community/Plugin<br />&gt;&gt;   =20
[copy]<br />&gt;&gt; Copying 10 files to /usr/local/GUS/gus_home/config<b=
r
/>&gt;&gt;    [mkdir]<br />&gt;&gt; Created dir:
/usr/local/GUS/gus_home/doc/GUS/Community<br />&gt;&gt;   [copy]<br
/>&gt;&gt; Copying 7 files to /usr/local/GUS/gus_home/doc/GUS/Community<b=
r
/>&gt;&gt;<br />&gt;&gt; [echo] .<br />&gt;&gt;     [echo] Installing
GUS/DBAdmin<br />&gt;&gt;      [copy] Copying<br />&gt;&gt; 8 files to
/usr/local/GUS/gus_home/bin<br />&gt;&gt;     [mkdir] Created dir:<br
/>&gt;&gt; /usr/local/GUS/gus_home/lib/perl/GUS/DBAdmin<br />&gt;&gt;    =
=20
[copy] Copying 6<br />&gt;&gt; files to
/usr/local/GUS/gus_home/lib/perl/GUS/DBAdmin<br />&gt;&gt;     [copy]<br
/>&gt;&gt; Copying 5 files to /usr/local/GUS/gus_home/lib/java<br
/>&gt;&gt;    [mkdir]<br />&gt;&gt; Created dir:
/usr/local/GUS/project_home/GUS/DBAdmin/classes<br />&gt;&gt;<br
/>&gt;&gt; [javac] Compiling 46 source files to<br />&gt;&gt;
/usr/local/GUS/project_home/GUS/DBAdmin/classes<br />&gt;&gt;     [javac]
Note:<br />&gt;&gt; Some input files use unchecked or unsafe
operations.<br />&gt;&gt;    [javac]<br />&gt;&gt; Note: Recompile with
-Xlint:unchecked for details.<br />&gt;&gt;      [jar]<br />&gt;&gt;
Building jar: /usr/local/GUS/gus_home/lib/java/GUS-DBAdmin.jar<br
/>&gt;&gt;<br />&gt;&gt; [echo] .<br />&gt;&gt;      [echo] Installing
GUS/GOPredict<br />&gt;&gt;      [copy]<br />&gt;&gt; Copying 3 files to
/usr/local/GUS/gus_home/bin<br />&gt;&gt;     [mkdir] Created<br
/>&gt;&gt; dir: /usr/local/GUS/gus_home/lib/perl/GUS/GOPredict<br
/>&gt;&gt;      [copy]<br />&gt;&gt; Copying 20 files to
/usr/local/GUS/gus_home/lib/perl/GUS/GOPredict<br />&gt;&gt;  [mkdir]
Created dir:<br />&gt;&gt;
/usr/local/GUS/gus_home/lib/perl/GUS/GOPredict/Plugin<br />&gt;&gt;   =20
[copy]<br />&gt;&gt; Copying 8 files to<br />&gt;&gt;
/usr/local/GUS/gus_home/lib/perl/GUS/GOPredict/Plugin<br />&gt;&gt;  =20
[mkdir]<br />&gt;&gt; Created dir:
/usr/local/GUS/gus_home/doc/GUS/GOPredict<br />&gt;&gt;   [copy]<br
/>&gt;&gt; Copying 1 file to /usr/local/GUS/gus_home/doc/GUS/GOPredict<br
/>&gt;&gt;<br />&gt;&gt; [mkdir] Created dir:
/usr/local/GUS/project_home/GUS/GOPredict/classes<br />&gt;&gt;   =20
[javac] Compiling 10 source files to<br />&gt;&gt;
/usr/local/GUS/project_home/GUS/GOPredict/classes<br />&gt;&gt;   =20
[javac] Note:<br />&gt;&gt; Some input files use unchecked or unsafe
operations.<br />&gt;&gt;    [javac]<br />&gt;&gt; Note: Recompile with
-Xlint:unchecked for details.<br />&gt;&gt;      [jar]<br />&gt;&gt;
Building jar: /usr/local/GUS/gus_home/lib/java/GUS-GOPredict.jar<br
/>&gt;&gt;<br />&gt;&gt; [echo] .<br />&gt;&gt;      [echo] Installing
GUS/Schema<br />&gt;&gt;     [mkdir] Created<br />&gt;&gt; dir:
/usr/local/GUS/project_home/GUS/Schema/classes<br />&gt;&gt;   =20
[javac]<br />&gt;&gt; Compiling 1 source file to<br />&gt;&gt;
/usr/local/GUS/project_home/GUS/Schema/classes<br />&gt;&gt;     [javac]
Note:<br />&gt;&gt;
/usr/local/GUS/project_home/GUS/Schema/src/java/org/gusdb/schema/InstallS=
chema<br
/>&gt;&gt; Task.java<br />&gt;&gt; uses unchecked or unsafe operations.<b=
r
/>&gt;&gt;     [javac] Note: Recompile with<br />&gt;&gt; -Xlint:unchecke=
d
for details.<br />&gt;&gt;       [jar] Building jar:<br />&gt;&gt;
/usr/local/GUS/gus_home/lib/java/GUS-Schema.jar<br />&gt;&gt;
[InstallSchema] Aug<br />&gt;&gt; 23, 2005 9:37:23 AM
org.gusdb.schema.InstallSchemaTask execute<br />&gt;&gt; [InstallSchema]
INFO: Reading database from<br />&gt;&gt;
/usr/local/GUS/project_home/GUS/Schema/gus_schema.xml<br />&gt;&gt;
[InstallSchema]<br />&gt;&gt; Aug 23, 2005 9:37:23 AM
org.gusdb.dbadmin.reader.SchemaReader doRead<br />&gt;&gt; [InstallSchema=
]
INFO: Reading Database<br />&gt;&gt; [InstallSchema] Aug 23, 2005<br
/>&gt;&gt; 9:37:27 AM org.gusdb.dbadmin.model.Database
resolveReferences<br />&gt;&gt; [InstallSchema] INFO: Resolving Database
References<br />&gt;&gt; [InstallSchema]<br />&gt;&gt; Aug 23, 2005
9:37:28 AM org.gusdb.dbadmin.util.DatabaseValidator<br />&gt;&gt;
validate<br />&gt;&gt; [InstallSchema] INFO: Validating Database:
'null'<br />&gt;&gt; [InstallSchema] Aug 23, 2005 9:37:28 AM<br />&gt;&gt=
;
org.gusdb.schema.InstallSchemaTask setTablespace<br />&gt;&gt;
[InstallSchema]<br />&gt;&gt; INFO: Setting tablespaces to gusdb<br
/>&gt;&gt; [InstallSchema] Aug 23, 2005<br />&gt;&gt; 9:37:28 AM
org.gusdb.dbadmin.util.DatabaseValidator validate<br />&gt;&gt;
[InstallSchema] INFO: Validating Database: 'null'<br />&gt;&gt;
[InstallSchema]<br />&gt;&gt; Aug 23, 2005 9:37:28 AM
org.gusdb.dbadmin.writer.SchemaWriter write<br />&gt;&gt; [InstallSchema]
INFO: Writing Database<br />&gt;&gt; [InstallSchema] Aug 23, 2005<br
/>&gt;&gt; 9:37:29 AM org.gusdb.dbadmin.util.DatabaseValidator validate<b=
r
/>&gt;&gt; [InstallSchema] INFO: Validating Database: 'null'<br />&gt;&gt=
;
[InstallSchema]<br />&gt;&gt; Aug 23, 2005 9:37:29 AM
org.gusdb.dbadmin.writer.SchemaWriter write<br />&gt;&gt; [InstallSchema]
INFO: Writing Database<br />&gt;&gt;<br />&gt;&gt; BUILD FAILED<br
/>&gt;&gt; /usr/local/GUS/project_home/install/build.xml:28: The followin=
g
error<br />&gt;&gt; occurred while executing this line:<br />&gt;&gt;
/usr/local/GUS/project_home/GUS/build.xml:92: java.io.IOException:
Error<br />&gt;&gt; executing SQL: '<br />&gt;&gt; ALTER USER RAD QUOTA
UNLIMITED ON gusdb' Error:<br />&gt;&gt; ORA-00959: tablespace 'GUSDB'
does not exist<br />&gt;&gt;<br />&gt;&gt;<br />&gt;&gt; Total<br
/>&gt;&gt; time: 22 seconds<br />&gt;&gt;<br />&gt;&gt;<br />&gt;&gt; The
user GUS<br />&gt;&gt; uses to connect has all sysdba privileges but the
related to rule, rule<br />&gt;&gt; set and evaluation context.<br
/>&gt;&gt;<br />&gt;&gt; I believe that somehow the build<br />&gt;&gt;
script can't not connect to the gusdb tablespace sometimes. And there's<b=
r
/>&gt;&gt; another strange thing with the DatabaseValidator at some lines
like<br />&gt;&gt; this:<br />&gt;&gt;<br />&gt;&gt;
org.gusdb.dbadmin.util.DatabaseValidator<br />&gt;&gt; validate<br
/>&gt;&gt;<br />&gt;&gt; [InstallSchema] INFO: Validating Database:
'null'<br />&gt;&gt;<br />&gt;&gt; Can anyone give me a tip?<br
/>&gt;&gt;<br />&gt;&gt; Thanks<br />&gt;&gt;<br />&gt;&gt; Adhemar
Zerlotini Neto<br />&gt;&gt; Centro de Pesquisas Ren=E9 Rachou - FIOCRUZ<=
br
/>&gt;&gt; Av. Augusto de Lima 1715<br />&gt;&gt; BH MG 30190-002,
Brazil<br />&gt;&gt; Phone: +55-31-3349-7785<br />&gt;&gt;
------------------------------------------------------- SF.Net email is<b=
r
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19-22, 2005<br />&gt;&gt; * San<br />&gt;&gt; Francisco, CA * Development
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/>&gt;&gt; * Managing Projects  Teams * Testing  QA Security * Process
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/>&gt;&gt; _______________________________________________ Gusdev-gusdev
mailing<br />&gt;&gt; list<br />&gt;&gt;
Gus...@li...<br />&gt;&gt;
https://lists.sourceforge.net/lists/listinfo/gusdev-gusdev<br />&gt; <br
/>&gt; <br />&gt; <br />&gt; --<br />&gt; Centro de Pesquisas Ren=E9
Rachou/CPqRR - A FIOCRUZ em Minas Gerais.<br />&gt; Rene Rachou Research
Center/CPqRR - The Oswaldo Cruz Foundation in the<br />&gt; State of Mina=
s
Gerais-Brazil.<br />&gt; http://www.cpqrr.fiocruz.br<br />&gt; <br />&gt;
<br /><br /><br />Adhemar Zerlotini Neto<br />Centro de Pesquisas Ren=E9
Rachou - FIOCRUZ<br />Av. Augusto de Lima 1715<br />BH MG 30190-002,
Brazil<br />Phone: +55-31-3349-7785</adhemar>