RE: [GUSDEV] Loading Prosite DB

[Kumar, S. \(Contr\) <San...@ng...>]

Hi Aaron,
   Definetly we are interested in this as well.In the mean while I will =
start writing Plugin for the "ProSite data", which is in the format =
mentioed in below given url.
I don't know whether you have already decided the tables and columns =
where you are going to store such data. If yes then could you pl. share =
that with me.

Thanks
Sanjeev

-----Original Message-----
From: Aaron J. Mackey [mailto:am...@pc...]
Sent: Tuesday, August 02, 2005 11:25 AM
Cc: Kumar, Sanjeev (Contr); gus...@li...
Subject: Re: [GUSDEV] Loading Prosite DB


FYI, we are currently developing a plugin to load such data from =20
InterProScan ... we're happy to collaborate with interested parties.

-Aaron

On Aug 2, 2005, at 11:21 AM, Chris Stoeckert wrote:

> Hi Sanjeev,
> I don't think we have a loader at CBIL for Prosite. We load Prodom =20
> and CDD (pfam, SMART).
> Cheers,
> Chris
>
> On Aug 1, 2005, at 4:49 PM, Kumar, Sanjeev (Contr) wrote:
>
>
>> Hi,
>>   Do we have Plugin to load PrositeDB data related to Protein =20
>> motif? The data is available
>>   at url address : http://ca.expasy.org/prosite/
>>
>> Thanks
>> Sanjeev
>>
>>
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--
Aaron J. Mackey, Ph.D.
Project Manager, ApiDB Bioinformatics Resource Center
Penn Genomics Institute, University of Pennsylvania
email:  am...@pc...
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