Re: [GUSDEV] RNAFeature versus RNAType

[Chris S. <sto...@pc...>]

An addendum after further discussion with Steve, Debbie, and Ed.

DoTS.Transcript: This view is for mRNAs (protein coding RNAs) that  
require GenBank-type attributes.
RNAFeature: This view is also for EST assemblies that may or may be  
protein-coding.

Chris

On Jul 19, 2005, at 5:01 PM, Chris Stoeckert wrote:

> Hi,
> There has been some discussion as to the history, semantics, and  
> usage of RNAType versus RNAFeature. After digging into old emails a  
> bit more and with helpful prodding from Steve, I believe that I can  
> define the usage of these NAFeature views.
>
> RNAFeature: This view is for mRNAs (protein coding RNAs). This is  
> why it has attributes referring to translation.
> RNAType: This view is for non-coding RNAs. In the CBIL instance of  
> GUS, we have rRNA, tRNA, snRNA, snoRNA, and scRNA.
>
> Chris
>
>
>
> -------------------------------------------------------
> SF.Net email is sponsored by: Discover Easy Linux Migration Strategies
> from IBM. Find simple to follow Roadmaps, straightforward articles,
> informative Webcasts and more! Get everything you need to get up to
> speed, fast. http://ads.osdn.com/?ad_id=7477&alloc_id=16492&op=click
> _______________________________________________
> Gusdev-gusdev mailing list
> Gus...@li...
> https://lists.sourceforge.net/lists/listinfo/gusdev-gusdev
>