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Re: [GUSDEV] Re: GUS 3.5 installation failure
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From: Haiming W. <hw...@ug...> - 2005-06-27 15:40:09
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GUS 3.5 installation was running very smoothly during my test. It took about 30 minutes and most of time is spent in generating perl and java objects. Excellent works by the GUS team. I use ant 1.6.5, java 1.5.0. However, I think java 1.4.2 and ant 1.6.4 should work as well. I don't have $CLASSPATH in my environment variables. I suggest that either change it to 'CLASSPATH=.:$GUS_HOME/gus_home/lib/java' or comment out. -Haiming On Mon, 2005-06-27 at 11:07, Jian Lu wrote: > Here is my system env. > > ANT_HOME=/home/gmod/gus/all_software/apache-ant > PROJECT_HOME=/home/brcgusts/GUS/project_home > JAVA_HOME=/usr/lib/java > CLASSPATH=$GUS_HOME/gus_home/lib/java > > $java -version > java version "1.4.2_04" > Java(TM) 2 Runtime Environment, Standard Edition (build 1.4.2_04-b05) > Java HotSpot(TM) Client VM (build 1.4.2_04-b05, mixed mode) > > apache-ant: 1.6.4 > > Could you let me know your system env? > > Thanks. > > Jian > > Haiming Wang wrote: > > I am guessing that although you have commons logging in your compile > > classpath it isn't in your runtime. Please check both Java and Ant > > version, especially Ant (1.6.1 or above). > > > > Also, echo $CLASSPATH to see if there are other commons-logging.jar > > before the GUS's commons-logging.jar. > > > > I hope this is helpful. > > > > -Haiming > > > > > > > > On Sun, 2005-06-26 at 16:19, Jian Lu wrote: > > > > > Hi Mike, > > > The commons-logging.jar is in my $GUS_HOME/lib/java. > > > Jian > > > > > > Michael Saffitz wrote: > > > > > > > Hi Jian, > > > > > > > > Can you confirm that the commons-logging.jar is in your $GUS_HOME/lib/java > > > > (it should have been installed from $PROJECT_HOME/GUS/DBAdmin/lib/java/ > > > > > > > > Thanks, > > > > > > > > Mike > > > > > > > > On 6/25/05 5:02 PM, "Jian Lu" <jl...@vb...> wrote: > > > > > > > > > > > > > > > > > I downloaded the official release, followed the installation instruction > > > > > and failed to install. Please advise. Thank you. > > > > > > > > > > build GUS install -append -installDBSchema > > > > > [WritePropertyFiles] Jun 25, 2005 3:02:40 PM > > > > > org.gusdb.install.WritePropertyFileTask writeInstallProp > > > > > [WritePropertyFiles] INFO: Recreating install.prop file > > > > > [WritePropertyFiles] Jun 25, 2005 3:02:40 PM > > > > > org.gusdb.install.WritePropertyFileTask writePluginProp > > > > > [WritePropertyFiles] INFO: Recreating GUS-PluginMgr.prop file > > > > > [copy] Copying 1 file to /home/brcgusts/GUS/gus_home/config > > > > > [copy] Copying 1 file to /home/brcgusts/GUS/gus_home/config > > > > > [echo] . > > > > > [echo] Installing CBIL/Bio > > > > > [echo] . > > > > > [echo] Installing CBIL/CSP > > > > > [echo] . > > > > > [echo] Installing CBIL/Util > > > > > [echo] . > > > > > [echo] Installing CBIL/HQ > > > > > [echo] . > > > > > [echo] Installing CBIL/ObjectMapper > > > > > [concat] No existing files and no nested text, doing nothing > > > > > [echo] . > > > > > [echo] Installing GUS/Supported > > > > > [echo] . > > > > > [echo] Installing GUS/Community > > > > > [echo] . > > > > > [echo] Installing GUS/DBAdmin > > > > > [echo] . > > > > > [echo] Installing GUS/GOPredict > > > > > [echo] . > > > > > [echo] Installing GUS/Schema > > > > > [InstallSchema] Jun 25, 2005 3:02:46 PM > > > > > org.gusdb.schema.InstallSchemaTask execute > > > > > [InstallSchema] INFO: Reading database from > > > > > /home/brcgusts/GUS/project_home/GUS/Schema/gus_schema.xml > > > > > [InstallSchema] Jun 25, 2005 3:02:46 PM > > > > > org.gusdb.dbadmin.reader.SchemaReader doRead > > > > > [InstallSchema] INFO: Reading Database > > > > > [InstallSchema] Jun 25, 2005 3:02:46 PM > > > > > org.apache.commons.digester.Digester startElement > > > > > [InstallSchema] SEVERE: Begin event threw error > > > > > [InstallSchema] java.lang.NoClassDefFoundError: > > > > > org/apache/commons/logging/LogFactory > > > > > [InstallSchema] at > > > > > > > > > > > > > > > > > > > org.apache.commons.beanutils.ConvertUtilsBean.<init>(ConvertUtilsBean.java:130> > > > > ) > > > > > > > > > > > > > [InstallSchema] at > > > > > org.apache.commons.beanutils.BeanUtilsBean.<init>(BeanUtilsBean.java:110) > > > > > [InstallSchema] at > > > > > org.apache.commons.beanutils.BeanUtilsBean$1.initialValue(BeanUtilsBean.java:6 > > > > > 8) > > > > > [InstallSchema] at > > > > > org.apache.commons.beanutils.ContextClassLoaderLocal.get(ContextClassLoaderLoc > > > > > al.java:80) > > > > > [InstallSchema] at > > > > > org.apache.commons.beanutils.BeanUtilsBean.getInstance(BeanUtilsBean.java:78) > > > > > [InstallSchema] at > > > > > org.apache.commons.beanutils.BeanUtils.populate(BeanUtils.java:298) > > > > > [InstallSchema] at > > > > > > > > > > > > > > > > > > > org.apache.commons.digester.SetPropertiesRule.begin(SetPropertiesRule.java:217> > > > > ) > > > > > > > > > > > > > [InstallSchema] at > > > > > org.apache.commons.digester.Rule.begin(Rule.java:152) > > > > > [InstallSchema] at > > > > > org.apache.commons.digester.Digester.startElement(Digester.java:1286) > > > > > [InstallSchema] at > > > > > org.apache.xerces.parsers.AbstractSAXParser.startElement(Unknown Source) > > > > > [InstallSchema] at > > > > > org.apache.xerces.impl.dtd.XMLDTDValidator.startElement(Unknown Source) > > > > > [InstallSchema] at > > > > > org.apache.xerces.impl.XMLDocumentFragmentScannerImpl.scanStartElement(Unknown > > > > > Source) > > > > > [InstallSchema] at > > > > > org.apache.xerces.impl.XMLDocumentScannerImpl$ContentDispatcher.scanRootElemen > > > > > tHook(Unknown > > > > > Source) > > > > > [InstallSchema] at > > > > > org.apache.xerces.impl.XMLDocumentFragmentScannerImpl$FragmentContentDispatche > > > > > r.dispatch(Unknown > > > > > Source) > > > > > [InstallSchema] at > > > > > org.apache.xerces.impl.XMLDocumentFragmentScannerImpl.scanDocument(Unknown > > > > > Source) > > > > > [InstallSchema] at > > > > > org.apache.xerces.parsers.XML11Configuration.parse(Unknown Source) > > > > > [InstallSchema] at > > > > > org.apache.xerces.parsers.XML11Configuration.parse(Unknown Source) > > > > > [InstallSchema] at > > > > > org.apache.xerces.parsers.XMLParser.parse(Unknown Source) > > > > > [InstallSchema] at > > > > > org.apache.xerces.parsers.AbstractSAXParser.parse(Unknown Source) > > > > > [InstallSchema] at > > > > > org.apache.commons.digester.Digester.parse(Digester.java:1591) > > > > > [InstallSchema] at > > > > > org.gusdb.dbadmin.reader.XMLReader.readDatabase(XMLReader.java:43) > > > > > [InstallSchema] at > > > > > org.gusdb.dbadmin.reader.SchemaReader.doRead(SchemaReader.java:50) > > > > > [InstallSchema] at > > > > > org.gusdb.dbadmin.reader.SchemaReader.read(SchemaReader.java:38) > > > > > [InstallSchema] at > > > > > org.gusdb.schema.InstallSchemaTask.execute(InstallSchemaTask.java:89) > > > > > [InstallSchema] at > > > > > org.apache.tools.ant.UnknownElement.execute(UnknownElement.java:275) > > > > > [InstallSchema] at org.apache.tools.ant.Task.perform(Task.java:364) > > > > > [InstallSchema] at > > > > > org.apache.tools.ant.Target.execute(Target.java:341) > > > > > [InstallSchema] at > > > > > org.apache.tools.ant.Target.performTasks(Target.java:369) > > > > > [InstallSchema] at > > > > > org.apache.tools.ant.Project.executeSortedTargets(Project.java:1216) > > > > > [InstallSchema] at > > > > > org.apache.tools.ant.helper.SingleCheckExecutor.executeTargets(SingleCheckExec > > > > > utor.java:37) > > > > > [InstallSchema] at > > > > > org.apache.tools.ant.Project.executeTargets(Project.java:1068) > > > > > [InstallSchema] at > > > > > org.apache.tools.ant.taskdefs.Ant.execute(Ant.java:382) > > > > > [InstallSchema] at > > > > > org.apache.tools.ant.UnknownElement.execute(UnknownElement.java:275) > > > > > [InstallSchema] at org.apache.tools.ant.Task.perform(Task.java:364) > > > > > [InstallSchema] at > > > > > org.apache.tools.ant.Target.execute(Target.java:341) > > > > > [InstallSchema] at > > > > > org.apache.tools.ant.Target.performTasks(Target.java:369) > > > > > [InstallSchema] at > > > > > org.apache.tools.ant.Project.executeSortedTargets(Project.java:1216) > > > > > [InstallSchema] at > > > > > org.apache.tools.ant.Project.executeTarget(Project.java:1185) > > > > > [InstallSchema] at > > > > > org.apache.tools.ant.helper.DefaultExecutor.executeTargets(DefaultExecutor.jav > > > > > a:40) > > > > > [InstallSchema] at > > > > > org.apache.tools.ant.Project.executeTargets(Project.java:1068) > > > > > [InstallSchema] at org.apache.tools.ant.Main.runBuild(Main.java:668) > > > > > [InstallSchema] at org.apache.tools.ant.Main.startAnt(Main.java:187) > > > > > [InstallSchema] at > > > > > org.apache.tools.ant.launch.Launcher.run(Launcher.java:246) > > > > > [InstallSchema] at > > > > > org.apache.tools.ant.launch.Launcher.main(Launcher.java:67) > > > > > > > > > > BUILD FAILED > > > > > /home/brcgusts/GUS/project_home/install/build.xml:28: The following > > > > > error occurred while executing this line: > > > > > java.lang.NoClassDefFoundError: org/apache/commons/logging/LogFactory > > > > > > > > > > Total time: 6 seconds > > > > > > > > > > > > > > > > > > > ------------------------------------------------------- > > > > SF.Net email is sponsored by: Discover Easy Linux Migration Strategies > > > > from IBM. Find simple to follow Roadmaps, straightforward articles, > > > > informative Webcasts and more! Get everything you need to get up to > > > > speed, fast. http://ads.osdn.com/?ad_id=7477&alloc_id=16492&op=click > > > > _______________________________________________ > > > > Gusdev-gusdev mailing list > > > > Gus...@li... > > > > https://lists.sourceforge.net/lists/listinfo/gusdev-gusdev > > > > > > > > > > > > > > ------------------------------------------------------- > > SF.Net email is sponsored by: Discover Easy Linux Migration Strategies > > from IBM. Find simple to follow Roadmaps, straightforward articles, > > informative Webcasts and more! Get everything you need to get up to > > speed, fast. http://ads.osdn.com/?ad_id=7477&alloc_id=16492&op=click > > _______________________________________________ > > Gusdev-gusdev mailing list > > Gus...@li... > > https://lists.sourceforge.net/lists/listinfo/gusdev-gusdev > > > |
