Menu
▾
▴
Re: [GUSDEV] Re: GUS 3.5 installation failure
|
From: Michael S. <msa...@pc...> - 2005-06-27 14:58:16
|
On 6/27/05 10:50 AM, "Haiming Wang" <hw...@ug...> wrote: > I am guessing that although you have commons logging in your compile > classpath it isn't in your runtime. Please check both Java and Ant > version, especially Ant (1.6.1 or above). The build system should add it to the runtime classpath. The suggestion about ant is a good one, and it probably makes sense to double check your other requirements as well. > > Also, echo $CLASSPATH to see if there are other commons-logging.jar > before the GUS's commons-logging.jar. Also, if you had a previous version of GUS or GUS 3.5 in the same directory that you're installing into, it may make sense to clean out that directory before doing an install. --Mike > > I hope this is helpful. > > -Haiming > > > > On Sun, 2005-06-26 at 16:19, Jian Lu wrote: >> Hi Mike, >> The commons-logging.jar is in my $GUS_HOME/lib/java. >> Jian >> >> Michael Saffitz wrote: >>> Hi Jian, >>> >>> Can you confirm that the commons-logging.jar is in your $GUS_HOME/lib/java >>> (it should have been installed from $PROJECT_HOME/GUS/DBAdmin/lib/java/ >>> >>> Thanks, >>> >>> Mike >>> >>> On 6/25/05 5:02 PM, "Jian Lu" <jl...@vb...> wrote: >>> >>> >>>> I downloaded the official release, followed the installation instruction >>>> and failed to install. Please advise. Thank you. >>>> >>>> build GUS install -append -installDBSchema >>>> [WritePropertyFiles] Jun 25, 2005 3:02:40 PM >>>> org.gusdb.install.WritePropertyFileTask writeInstallProp >>>> [WritePropertyFiles] INFO: Recreating install.prop file >>>> [WritePropertyFiles] Jun 25, 2005 3:02:40 PM >>>> org.gusdb.install.WritePropertyFileTask writePluginProp >>>> [WritePropertyFiles] INFO: Recreating GUS-PluginMgr.prop file >>>> [copy] Copying 1 file to /home/brcgusts/GUS/gus_home/config >>>> [copy] Copying 1 file to /home/brcgusts/GUS/gus_home/config >>>> [echo] . >>>> [echo] Installing CBIL/Bio >>>> [echo] . >>>> [echo] Installing CBIL/CSP >>>> [echo] . >>>> [echo] Installing CBIL/Util >>>> [echo] . >>>> [echo] Installing CBIL/HQ >>>> [echo] . >>>> [echo] Installing CBIL/ObjectMapper >>>> [concat] No existing files and no nested text, doing nothing >>>> [echo] . >>>> [echo] Installing GUS/Supported >>>> [echo] . >>>> [echo] Installing GUS/Community >>>> [echo] . >>>> [echo] Installing GUS/DBAdmin >>>> [echo] . >>>> [echo] Installing GUS/GOPredict >>>> [echo] . >>>> [echo] Installing GUS/Schema >>>> [InstallSchema] Jun 25, 2005 3:02:46 PM >>>> org.gusdb.schema.InstallSchemaTask execute >>>> [InstallSchema] INFO: Reading database from >>>> /home/brcgusts/GUS/project_home/GUS/Schema/gus_schema.xml >>>> [InstallSchema] Jun 25, 2005 3:02:46 PM >>>> org.gusdb.dbadmin.reader.SchemaReader doRead >>>> [InstallSchema] INFO: Reading Database >>>> [InstallSchema] Jun 25, 2005 3:02:46 PM >>>> org.apache.commons.digester.Digester startElement >>>> [InstallSchema] SEVERE: Begin event threw error >>>> [InstallSchema] java.lang.NoClassDefFoundError: >>>> org/apache/commons/logging/LogFactory >>>> [InstallSchema] at >>>> >>>> >>> org.apache.commons.beanutils.ConvertUtilsBean.<init>(ConvertUtilsBean.java:1 >>> 30> >>> ) >>> >>>> [InstallSchema] at >>>> org.apache.commons.beanutils.BeanUtilsBean.<init>(BeanUtilsBean.java:110) >>>> [InstallSchema] at >>>> org.apache.commons.beanutils.BeanUtilsBean$1.initialValue(BeanUtilsBean.jav >>>> a:6 >>>> 8) >>>> [InstallSchema] at >>>> org.apache.commons.beanutils.ContextClassLoaderLocal.get(ContextClassLoader >>>> Loc >>>> al.java:80) >>>> [InstallSchema] at >>>> org.apache.commons.beanutils.BeanUtilsBean.getInstance(BeanUtilsBean.java:7 >>>> 8) >>>> [InstallSchema] at >>>> org.apache.commons.beanutils.BeanUtils.populate(BeanUtils.java:298) >>>> [InstallSchema] at >>>> >>>> >>> org.apache.commons.digester.SetPropertiesRule.begin(SetPropertiesRule.java:2 >>> 17> >>> ) >>> >>>> [InstallSchema] at >>>> org.apache.commons.digester.Rule.begin(Rule.java:152) >>>> [InstallSchema] at >>>> org.apache.commons.digester.Digester.startElement(Digester.java:1286) >>>> [InstallSchema] at >>>> org.apache.xerces.parsers.AbstractSAXParser.startElement(Unknown Source) >>>> [InstallSchema] at >>>> org.apache.xerces.impl.dtd.XMLDTDValidator.startElement(Unknown Source) >>>> [InstallSchema] at >>>> org.apache.xerces.impl.XMLDocumentFragmentScannerImpl.scanStartElement(Unkn >>>> own >>>> Source) >>>> [InstallSchema] at >>>> org.apache.xerces.impl.XMLDocumentScannerImpl$ContentDispatcher.scanRootEle >>>> men >>>> tHook(Unknown >>>> Source) >>>> [InstallSchema] at >>>> org.apache.xerces.impl.XMLDocumentFragmentScannerImpl$FragmentContentDispat >>>> che >>>> r.dispatch(Unknown >>>> Source) >>>> [InstallSchema] at >>>> org.apache.xerces.impl.XMLDocumentFragmentScannerImpl.scanDocument(Unknown >>>> Source) >>>> [InstallSchema] at >>>> org.apache.xerces.parsers.XML11Configuration.parse(Unknown Source) >>>> [InstallSchema] at >>>> org.apache.xerces.parsers.XML11Configuration.parse(Unknown Source) >>>> [InstallSchema] at >>>> org.apache.xerces.parsers.XMLParser.parse(Unknown Source) >>>> [InstallSchema] at >>>> org.apache.xerces.parsers.AbstractSAXParser.parse(Unknown Source) >>>> [InstallSchema] at >>>> org.apache.commons.digester.Digester.parse(Digester.java:1591) >>>> [InstallSchema] at >>>> org.gusdb.dbadmin.reader.XMLReader.readDatabase(XMLReader.java:43) >>>> [InstallSchema] at >>>> org.gusdb.dbadmin.reader.SchemaReader.doRead(SchemaReader.java:50) >>>> [InstallSchema] at >>>> org.gusdb.dbadmin.reader.SchemaReader.read(SchemaReader.java:38) >>>> [InstallSchema] at >>>> org.gusdb.schema.InstallSchemaTask.execute(InstallSchemaTask.java:89) >>>> [InstallSchema] at >>>> org.apache.tools.ant.UnknownElement.execute(UnknownElement.java:275) >>>> [InstallSchema] at org.apache.tools.ant.Task.perform(Task.java:364) >>>> [InstallSchema] at >>>> org.apache.tools.ant.Target.execute(Target.java:341) >>>> [InstallSchema] at >>>> org.apache.tools.ant.Target.performTasks(Target.java:369) >>>> [InstallSchema] at >>>> org.apache.tools.ant.Project.executeSortedTargets(Project.java:1216) >>>> [InstallSchema] at >>>> org.apache.tools.ant.helper.SingleCheckExecutor.executeTargets(SingleCheckE >>>> xec >>>> utor.java:37) >>>> [InstallSchema] at >>>> org.apache.tools.ant.Project.executeTargets(Project.java:1068) >>>> [InstallSchema] at >>>> org.apache.tools.ant.taskdefs.Ant.execute(Ant.java:382) >>>> [InstallSchema] at >>>> org.apache.tools.ant.UnknownElement.execute(UnknownElement.java:275) >>>> [InstallSchema] at org.apache.tools.ant.Task.perform(Task.java:364) >>>> [InstallSchema] at >>>> org.apache.tools.ant.Target.execute(Target.java:341) >>>> [InstallSchema] at >>>> org.apache.tools.ant.Target.performTasks(Target.java:369) >>>> [InstallSchema] at >>>> org.apache.tools.ant.Project.executeSortedTargets(Project.java:1216) >>>> [InstallSchema] at >>>> org.apache.tools.ant.Project.executeTarget(Project.java:1185) >>>> [InstallSchema] at >>>> org.apache.tools.ant.helper.DefaultExecutor.executeTargets(DefaultExecutor. >>>> jav >>>> a:40) >>>> [InstallSchema] at >>>> org.apache.tools.ant.Project.executeTargets(Project.java:1068) >>>> [InstallSchema] at >>>> org.apache.tools.ant.Main.runBuild(Main.java:668) >>>> [InstallSchema] at >>>> org.apache.tools.ant.Main.startAnt(Main.java:187) >>>> [InstallSchema] at >>>> org.apache.tools.ant.launch.Launcher.run(Launcher.java:246) >>>> [InstallSchema] at >>>> org.apache.tools.ant.launch.Launcher.main(Launcher.java:67) >>>> >>>> BUILD FAILED >>>> /home/brcgusts/GUS/project_home/install/build.xml:28: The following >>>> error occurred while executing this line: >>>> java.lang.NoClassDefFoundError: org/apache/commons/logging/LogFactory >>>> >>>> Total time: 6 seconds >>>> >>>> >>> >>> >>> >>> ------------------------------------------------------- >>> SF.Net email is sponsored by: Discover Easy Linux Migration Strategies >>> from IBM. Find simple to follow Roadmaps, straightforward articles, >>> informative Webcasts and more! Get everything you need to get up to >>> speed, fast. http://ads.osdn.com/?ad_id=7477&alloc_id=16492&op=click >>> _______________________________________________ >>> Gusdev-gusdev mailing list >>> Gus...@li... >>> https://lists.sourceforge.net/lists/listinfo/gusdev-gusdev >>> >> |
