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Re: [GUSDEV] Re: GUS 3.5 installation failure
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From: Michael S. <msa...@pc...> - 2005-06-27 14:51:08
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Hi Jian, Have you tried running this command a second time? It may be that the jar was installed on the first run (and not properly loaded in the classpath), and on the second run it is in the classpath and runs properly. It's strange because I believe these lines: [WritePropertyFiles] INFO: Recreating GUS-PluginMgr.prop file are written using the commons-logging libraries. Thanks, and sorry for the difficulties. (Has anyone else on the list successfully downloaded and installed 3.5?) --Mike On 6/26/05 4:19 PM, "Jian Lu" <jl...@vb...> wrote: > Hi Mike, > > The commons-logging.jar is in my $GUS_HOME/lib/java. > > Jian > > Michael Saffitz wrote: > >> Hi Jian, >> >> Can you confirm that the commons-logging.jar is in your $GUS_HOME/lib/java >> (it should have been installed from $PROJECT_HOME/GUS/DBAdmin/lib/java/ >> >> Thanks, >> >> Mike >> >> On 6/25/05 5:02 PM, "Jian Lu" <jl...@vb...> wrote: >> >> >> >>> I downloaded the official release, followed the installation instruction >>> and failed to install. Please advise. Thank you. >>> >>> build GUS install -append -installDBSchema >>> [WritePropertyFiles] Jun 25, 2005 3:02:40 PM >>> org.gusdb.install.WritePropertyFileTask writeInstallProp >>> [WritePropertyFiles] INFO: Recreating install.prop file >>> [WritePropertyFiles] Jun 25, 2005 3:02:40 PM >>> org.gusdb.install.WritePropertyFileTask writePluginProp >>> [WritePropertyFiles] INFO: Recreating GUS-PluginMgr.prop file >>> [copy] Copying 1 file to /home/brcgusts/GUS/gus_home/config >>> [copy] Copying 1 file to /home/brcgusts/GUS/gus_home/config >>> [echo] . >>> [echo] Installing CBIL/Bio >>> [echo] . >>> [echo] Installing CBIL/CSP >>> [echo] . >>> [echo] Installing CBIL/Util >>> [echo] . >>> [echo] Installing CBIL/HQ >>> [echo] . >>> [echo] Installing CBIL/ObjectMapper >>> [concat] No existing files and no nested text, doing nothing >>> [echo] . >>> [echo] Installing GUS/Supported >>> [echo] . >>> [echo] Installing GUS/Community >>> [echo] . >>> [echo] Installing GUS/DBAdmin >>> [echo] . >>> [echo] Installing GUS/GOPredict >>> [echo] . >>> [echo] Installing GUS/Schema >>> [InstallSchema] Jun 25, 2005 3:02:46 PM >>> org.gusdb.schema.InstallSchemaTask execute >>> [InstallSchema] INFO: Reading database from >>> /home/brcgusts/GUS/project_home/GUS/Schema/gus_schema.xml >>> [InstallSchema] Jun 25, 2005 3:02:46 PM >>> org.gusdb.dbadmin.reader.SchemaReader doRead >>> [InstallSchema] INFO: Reading Database >>> [InstallSchema] Jun 25, 2005 3:02:46 PM >>> org.apache.commons.digester.Digester startElement >>> [InstallSchema] SEVERE: Begin event threw error >>> [InstallSchema] java.lang.NoClassDefFoundError: >>> org/apache/commons/logging/LogFactory >>> [InstallSchema] at >>> >>> >>> >> org.apache.commons.beanutils.ConvertUtilsBean.<init>(ConvertUtilsBean.java:13 >> 0> >> ) >> >> >>> [InstallSchema] at >>> org.apache.commons.beanutils.BeanUtilsBean.<init>(BeanUtilsBean.java:110) >>> [InstallSchema] at >>> org.apache.commons.beanutils.BeanUtilsBean$1.initialValue(BeanUtilsBean.java >>> :6 >>> 8) >>> [InstallSchema] at >>> org.apache.commons.beanutils.ContextClassLoaderLocal.get(ContextClassLoaderL >>> oc >>> al.java:80) >>> [InstallSchema] at >>> org.apache.commons.beanutils.BeanUtilsBean.getInstance(BeanUtilsBean.java:78>>> ) >>> [InstallSchema] at >>> org.apache.commons.beanutils.BeanUtils.populate(BeanUtils.java:298) >>> [InstallSchema] at >>> >>> >>> >> org.apache.commons.digester.SetPropertiesRule.begin(SetPropertiesRule.java:21 >> 7> >> ) >> >> >>> [InstallSchema] at >>> org.apache.commons.digester.Rule.begin(Rule.java:152) >>> [InstallSchema] at >>> org.apache.commons.digester.Digester.startElement(Digester.java:1286) >>> [InstallSchema] at >>> org.apache.xerces.parsers.AbstractSAXParser.startElement(Unknown Source) >>> [InstallSchema] at >>> org.apache.xerces.impl.dtd.XMLDTDValidator.startElement(Unknown Source) >>> [InstallSchema] at >>> org.apache.xerces.impl.XMLDocumentFragmentScannerImpl.scanStartElement(Unkno >>> wn >>> Source) >>> [InstallSchema] at >>> org.apache.xerces.impl.XMLDocumentScannerImpl$ContentDispatcher.scanRootElem >>> en >>> tHook(Unknown >>> Source) >>> [InstallSchema] at >>> org.apache.xerces.impl.XMLDocumentFragmentScannerImpl$FragmentContentDispatc >>> he >>> r.dispatch(Unknown >>> Source) >>> [InstallSchema] at >>> org.apache.xerces.impl.XMLDocumentFragmentScannerImpl.scanDocument(Unknown >>> Source) >>> [InstallSchema] at >>> org.apache.xerces.parsers.XML11Configuration.parse(Unknown Source) >>> [InstallSchema] at >>> org.apache.xerces.parsers.XML11Configuration.parse(Unknown Source) >>> [InstallSchema] at >>> org.apache.xerces.parsers.XMLParser.parse(Unknown Source) >>> [InstallSchema] at >>> org.apache.xerces.parsers.AbstractSAXParser.parse(Unknown Source) >>> [InstallSchema] at >>> org.apache.commons.digester.Digester.parse(Digester.java:1591) >>> [InstallSchema] at >>> org.gusdb.dbadmin.reader.XMLReader.readDatabase(XMLReader.java:43) >>> [InstallSchema] at >>> org.gusdb.dbadmin.reader.SchemaReader.doRead(SchemaReader.java:50) >>> [InstallSchema] at >>> org.gusdb.dbadmin.reader.SchemaReader.read(SchemaReader.java:38) >>> [InstallSchema] at >>> org.gusdb.schema.InstallSchemaTask.execute(InstallSchemaTask.java:89) >>> [InstallSchema] at >>> org.apache.tools.ant.UnknownElement.execute(UnknownElement.java:275) >>> [InstallSchema] at org.apache.tools.ant.Task.perform(Task.java:364) >>> [InstallSchema] at >>> org.apache.tools.ant.Target.execute(Target.java:341) >>> [InstallSchema] at >>> org.apache.tools.ant.Target.performTasks(Target.java:369) >>> [InstallSchema] at >>> org.apache.tools.ant.Project.executeSortedTargets(Project.java:1216) >>> [InstallSchema] at >>> org.apache.tools.ant.helper.SingleCheckExecutor.executeTargets(SingleCheckEx >>> ec >>> utor.java:37) >>> [InstallSchema] at >>> org.apache.tools.ant.Project.executeTargets(Project.java:1068) >>> [InstallSchema] at >>> org.apache.tools.ant.taskdefs.Ant.execute(Ant.java:382) >>> [InstallSchema] at >>> org.apache.tools.ant.UnknownElement.execute(UnknownElement.java:275) >>> [InstallSchema] at org.apache.tools.ant.Task.perform(Task.java:364) >>> [InstallSchema] at >>> org.apache.tools.ant.Target.execute(Target.java:341) >>> [InstallSchema] at >>> org.apache.tools.ant.Target.performTasks(Target.java:369) >>> [InstallSchema] at >>> org.apache.tools.ant.Project.executeSortedTargets(Project.java:1216) >>> [InstallSchema] at >>> org.apache.tools.ant.Project.executeTarget(Project.java:1185) >>> [InstallSchema] at >>> org.apache.tools.ant.helper.DefaultExecutor.executeTargets(DefaultExecutor.j >>> av >>> a:40) >>> [InstallSchema] at >>> org.apache.tools.ant.Project.executeTargets(Project.java:1068) >>> [InstallSchema] at org.apache.tools.ant.Main.runBuild(Main.java:668) >>> [InstallSchema] at org.apache.tools.ant.Main.startAnt(Main.java:187) >>> [InstallSchema] at >>> org.apache.tools.ant.launch.Launcher.run(Launcher.java:246) >>> [InstallSchema] at >>> org.apache.tools.ant.launch.Launcher.main(Launcher.java:67) >>> >>> BUILD FAILED >>> /home/brcgusts/GUS/project_home/install/build.xml:28: The following >>> error occurred while executing this line: >>> java.lang.NoClassDefFoundError: org/apache/commons/logging/LogFactory >>> >>> Total time: 6 seconds >>> >>> >>> >> >> >> >> >> ------------------------------------------------------- >> SF.Net email is sponsored by: Discover Easy Linux Migration Strategies >> from IBM. 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