Re: [GUSDEV] Error in Loading NCBI data

[Jinal J. <jjh...@vb...>]

It's a warning and not an error! GBParser doesn't understand/load locus_tag 
and that's why it complains("warns") about it.  

A good test would be to double check if all gbk entries were loaded in 
dots.nafeature


On Thursday 02 June 2005 03:12 pm, Kumar, Sanjeev (Contr) wrote:
> Hi I am getting following error while loading the NCBI gene data using
> GBParser:
>
> Wed Jun 1 14:53:41 2005 INVALID QUALIFIER GUS::Model::DoTS::GeneFeature ::
> locus_tag :: MT0570 Wed Jun 1 14:53:41 2005 INVALID QUALIFIER
> GUS::Model::DoTS::Transcript :: locus_tag :: MT0570 Wed Jun 1 14:53:41 2005
> INVALID QUALIFIER GUS::Model::DoTS::GeneFeature :: locus_tag :: MT0571 Wed
> Jun 1 14:53:41 2005 INVALID QUALIFIER GUS::Model::DoTS::Transcript ::
> locus_tag :: MT0571 I have seen in the archive that couple of members had
> reported this problem earlier , but I couldn't locate the solution to this
> problem. I am using following command to load the data:
> $ ga GUS::Common::Plugin::GBParser
> --file=/home/domana/Downloads/data/AE000516.gbk --gbRel=146 --db_rel_id=200
> --verbose > AE000516.gbk.out
>
> Can any one help in finding the solution for this.
> Thanks
> Sanjeev
>
>
>
>
>
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