[Gusdev-gusdev] LoadBLATAlignment

[Mark S. H. <mh...@ug...>]

I loaded some est BLAT alignments dots.blatalignment with 
LoadBLATAlignment (ver 1.32) (how many times can I write blat alignment 
in one sentence?).

My dots.GeneFeatureSeqOverlap table  is empty and I'm thinking there 
should be data there because it's a child of blatalignment, PlasmoDB 
uses it and GFSO looks more usable than BA for finding est/gene 
overlaps. Although, since I aligned ests against whole contigs instead 
of individual sequences maybe GFSO won't help me.

Is there a plugin to populate GFSO?

Thanks,
Mark