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Re: [Gusdev-gusdev] ragistering plugin
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From: <fed...@bi...> - 2005-02-16 08:47:32
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Of course!
1) ga +create GUS::GOPredict::Plugin::CopyAASeqGoFuncToProtGoFunc
ERROR: Can't locate Objects/GUSdev/AASequenceGOFunction.pm in @INC (@INC
contains: /opt/gus_home/lib/perl
/usr/lib/perl5/5.8.0/i386-linux-thread-multi /usr/lib/perl5/5.8.0
/usr/lib/perl5/site_perl/5.8.0/i386-linux-thread-multi
/usr/lib/perl5/site_perl/5.8.0 /usr/lib/perl5/site_perl
/usr/lib/perl5/vendor_perl/5.8.0/i386-linux-thread-multi
/usr/lib/perl5/vendor_perl/5.8.0 /usr/lib/perl5/vendor_perl .) at
/opt/gus_home/lib/perl/GUS/GOPredict/Plugin/CopyAASeqGoFuncToProtGoFunc.pm
line 24.
Compilation failed in require at (eval 3) line 1.
STACK TRACE
GUS::PluginMgr::Plugin::error('GUS::PluginMgr::GusApplication=HASH(0x804d054)','Can\'t
locate Objects/GUSdev/AASequenceGOFunction.pm in @INC ...') called at
/opt/gus_home/lib/perl/GUS/PluginMgr/GusApplication.pm line 254
GUS::PluginMgr::GusApplication::newFromPluginName('GUS::PluginMgr::GusApplication=HASH(0x804d054)','GUS::GOPredict::Plugin::CopyAASeqGoFuncToProtGoFunc')
called at /opt/gus_home/lib/perl/GUS/PluginMgr/GusApplication.pm
line 688
GUS::PluginMgr::GusApplication::create_or_update_implementation('GUS::PluginMgr::GusApplication=HASH(0x804d054)',0,'GUS::GOPredict::Plugin::CopyAASeqGoFuncToProtGoFunc')
called at /opt/gus_home/lib/perl/GUS/PluginMgr/GusApplication.pm
line 479
GUS::PluginMgr::GusApplication::doMajorMode_Create('GUS::PluginMgr::GusApplication=HASH(0x804d054)','GUS::GOPredict::Plugin::CopyAASeqGoFuncToProtGoFunc')
called at /opt/gus_home/lib/perl/GUS/PluginMgr/GusApplication.pm
line 289
GUS::PluginMgr::GusApplication::doMajorMode('GUS::PluginMgr::GusApplication=HASH(0x804d054)','GUS::GOPredict::Plugin::CopyAASeqGoFuncToProtGoFunc')
called at /opt/gus_home/lib/perl/GUS/PluginMgr/GusApplication.pm
line 198
GUS::PluginMgr::GusApplication::parseAndRun('GUS::PluginMgr::GusApplication=HASH(0x804d054)','ARRAY(0x80606d0)')
called at /opt/gus_home/bin/ga line 11
2) ga +create GUS::GOPredict::Plugin::DeleteGoPredictions
ERROR: Can't locate Objects/GUSdev/AASequenceGOFunction.pm in @INC (@INC
contains: /opt/gus_home/lib/perl
/usr/lib/perl5/5.8.0/i386-linux-thread-multi /usr/lib/perl5/5.8.0
/usr/lib/perl5/site_perl/5.8.0/i386-linux-thread-multi
/usr/lib/perl5/site_perl/5.8.0 /usr/lib/perl5/site_perl
/usr/lib/perl5/vendor_perl/5.8.0/i386-linux-thread-multi
/usr/lib/perl5/vendor_perl/5.8.0 /usr/lib/perl5/vendor_perl .) at
/opt/gus_home/lib/perl/GUS/GOPredict/Plugin/DeleteGoPredictions.pm line
12.
BEGIN failed--compilation aborted at
/opt/gus_home/lib/perl/GUS/GOPredict/Plugin/DeleteGoPredictions.pm line
12.
Compilation failed in require at (eval 3) line 1.
STACK TRACE
GUS::PluginMgr::Plugin::error('GUS::PluginMgr::GusApplication=HASH(0x804d054)','Can\'t
locate Objects/GUSdev/AASequenceGOFunction.pm in @INC ...') called at
/opt/gus_home/lib/perl/GUS/PluginMgr/GusApplication.pm line 254
(..than the same as before)
3) ga +create GUS::GOPredict::Plugin::MakeGoPredictions
ERROR: Can't locate object method "new" via package
"GUS::GOPredict::Plugin::MakeGoPredictions" at (eval 3) line 1.
STACK TRACE
GUS::PluginMgr::Plugin::error('GUS::PluginMgr::GusApplication=HASH(0x804d054)','Can\'t
locate object method "new" via package "GUS::GOPredict...') called at
/opt/gus_home/lib/perl/GUS/PluginMgr/GusApplication.pm line 254
(..than the same as before)
4) ga +create GUS::RAD::Plugin::AnalysisResultLoader
ERROR: Can't locate GUS/Model/RAD3/AssayAnalysis.pm in @INC (@INC
contains: /opt/gus_home/lib/perl
/usr/lib/perl5/5.8.0/i386-linux-thread-multi /usr/lib/perl5/5.8.0
/usr/lib/perl5/site_perl/5.8.0/i386-linux-thread-multi
/usr/lib/perl5/site_perl/5.8.0 /usr/lib/perl5/site_perl
/usr/lib/perl5/vendor_perl/5.8.0/i386-linux-thread-multi
/usr/lib/perl5/vendor_perl/5.8.0 /usr/lib/perl5/vendor_perl .) at
/opt/gus_home/lib/perl/GUS/RAD/Plugin/AnalysisResultLoader.pm line 22.
BEGIN failed--compilation aborted at
/opt/gus_home/lib/perl/GUS/RAD/Plugin/AnalysisResultLoader.pm line 22.
Compilation failed in require at (eval 3) line 1.
STACK TRACE
GUS::PluginMgr::Plugin::error('GUS::PluginMgr::GusApplication=HASH(0x804d054)','Can\'t
locate GUS/Model/RAD3/AssayAnalysis.pm in @INC (@INC c...') called at
/opt/gus_home/lib/perl/GUS/PluginMgr/GusApplication.pm line 254
(..than the same as before)
5) ga +create GUS::RAD::Plugin::AnalysisResultLoader
ERROR: Can't locate GUS/Model/RAD3/AssayAnalysis.pm in @INC (@INC
contains: /opt/gus_home/lib/perl
/usr/lib/perl5/5.8.0/i386-linux-thread-multi /usr/lib/perl5/5.8.0
/usr/lib/perl5/site_perl/5.8.0/i386-linux-thread-multi
/usr/lib/perl5/site_perl/5.8.0 /usr/lib/perl5/site_perl
/usr/lib/perl5/vendor_perl/5.8.0/i386-linux-thread-multi
/usr/lib/perl5/vendor_perl/5.8.0 /usr/lib/perl5/vendor_perl .) at
/opt/gus_home/lib/perl/GUS/RAD/Plugin/AnalysisResultLoader.pm line 22.
BEGIN failed--compilation aborted at
/opt/gus_home/lib/perl/GUS/RAD/Plugin/AnalysisResultLoader.pm line 22.
Compilation failed in require at (eval 3) line 1.
STACK TRACE
GUS::PluginMgr::Plugin::error('GUS::PluginMgr::GusApplication=HASH(0x804d054)','Can\'t
locate GUS/Model/RAD3/AssayAnalysis.pm in @INC (@INC c...') called at
/opt/gus_home/lib/perl/GUS/PluginMgr/GusApplication.pm line 254
(..than the same as before)
Thanks, Federica
> can you send the error messages?
>
> thanks
> steve
>
> fed...@bi... wrote:
>
>>Hi guys! I'm registering the plugin class name with ga; I had some
>>problems because ga can't find some perl files: AASequenceGOFunction.pm,
>>ArrayControlLoader.pm, AssayAnalysis.pm.
>>And olso in the MakeGoPredictions plugin I had an error: Can't locate
>>object method "new" via package
>>"GUS::GOPredict::Plugin::MakeGoPredictions".
>>Do you know why?? I think the building process has been correctly made...
>>Thanks
>>Federica
>>
>>
>>
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>
>
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